Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC018529.2-202ENST00000611482 3087 ntBASIC12.39□□□□□ -0.43
COL8A2P25067 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.39□□□□□ -0.43
COL8A2P25067 FAM45BP-202ENST00000592932 1624 ntBASIC12.39□□□□□ -0.43
COL8A2P25067 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.39□□□□□ -0.43
COL8A2P25067 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL8A2P25067 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.38□□□□□ -0.43
COL8A2P25067 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
COL8A2P25067 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.38□□□□□ -0.43
COL8A2P25067 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 MIR600HG-201ENST00000449175 5984 ntBASIC12.38□□□□□ -0.43
COL8A2P25067 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
COL8A2P25067 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
COL8A2P25067 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
COL8A2P25067 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.38□□□□□ -0.43
COL8A2P25067 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.38□□□□□ -0.43
COL8A2P25067 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.38□□□□□ -0.43
COL8A2P25067 AC125604.1-201ENST00000496255 707 ntBASIC12.38□□□□□ -0.43
COL8A2P25067 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.38□□□□□ -0.43
COL8A2P25067 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.38□□□□□ -0.43
COL8A2P25067 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.38□□□□□ -0.43
COL8A2P25067 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.38□□□□□ -0.43
COL8A2P25067 AP001505.2-201ENST00000616815 443 ntBASIC12.38□□□□□ -0.43
COL8A2P25067 AC100757.4-201ENST00000626934 759 ntBASIC12.38□□□□□ -0.43
COL8A2P25067 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.38□□□□□ -0.43
COL8A2P25067 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.38□□□□□ -0.43
COL8A2P25067 FAM90A7P-201ENST00000382628 1395 ntBASIC12.38□□□□□ -0.43
COL8A2P25067 FAM90A23P-201ENST00000400136 1395 ntBASIC12.38□□□□□ -0.43
COL8A2P25067 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
COL8A2P25067 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
COL8A2P25067 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.38□□□□□ -0.43
COL8A2P25067 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.38□□□□□ -0.43
COL8A2P25067 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
COL8A2P25067 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 AL157791.1-201ENST00000553667 1699 ntBASIC12.38□□□□□ -0.43
COL8A2P25067 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.38□□□□□ -0.43
COL8A2P25067 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
COL8A2P25067 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
COL8A2P25067 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL8A2P25067 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.38□□□□□ -0.43
COL8A2P25067 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.37□□□□□ -0.43
COL8A2P25067 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
COL8A2P25067 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.37□□□□□ -0.43
COL8A2P25067 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 AC005089.1-201ENST00000619486 2241 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
COL8A2P25067 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.37□□□□□ -0.43
COL8A2P25067 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 RN7SKP214-201ENST00000364208 315 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.37□□□□□ -0.43
COL8A2P25067 ACTG1P2-201ENST00000415776 1125 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.37□□□□□ -0.43
COL8A2P25067 ACTG1P11-201ENST00000425411 1125 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 AL645933.1-201ENST00000440087 609 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms