Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
IFNA1P01562 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
IFNA1P01562 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
IFNA1P01562 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.55
IFNA1P01562 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
IFNA1P01562 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
IFNA1P01562 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
IFNA1P01562 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
IFNA1P01562 AGAP10P-201ENST00000454844 2418 ntBASIC11.65□□□□□ -0.55
IFNA1P01562 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
IFNA1P01562 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
IFNA1P01562 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
IFNA1P01562 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
IFNA1P01562 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
IFNA1P01562 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
IFNA1P01562 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
IFNA1P01562 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
IFNA1P01562 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.64□□□□□ -0.55
IFNA1P01562 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.64□□□□□ -0.55
IFNA1P01562 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.64□□□□□ -0.55
IFNA1P01562 AC136604.1-202ENST00000425471 771 ntBASIC11.64□□□□□ -0.55
IFNA1P01562 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 HCG4B-203ENST00000450128 991 ntBASIC11.64□□□□□ -0.55
IFNA1P01562 KRT18P43-201ENST00000469825 1281 ntBASIC11.64□□□□□ -0.55
IFNA1P01562 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.64□□□□□ -0.55
IFNA1P01562 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.64□□□□□ -0.55
IFNA1P01562 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 AC112191.1-201ENST00000523689 701 ntBASIC11.64□□□□□ -0.55
IFNA1P01562 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 AC135782.3-201ENST00000562782 2105 ntBASIC11.64□□□□□ -0.55
IFNA1P01562 AC091304.2-201ENST00000564639 760 ntBASIC11.64□□□□□ -0.55
IFNA1P01562 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
IFNA1P01562 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.64□□□□□ -0.55
IFNA1P01562 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
IFNA1P01562 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
IFNA1P01562 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
IFNA1P01562 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.63□□□□□ -0.55
IFNA1P01562 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 AKAP8P1-201ENST00000434743 1349 ntBASIC11.63□□□□□ -0.55
IFNA1P01562 KRT8P35-201ENST00000483942 1338 ntBASIC11.63□□□□□ -0.55
IFNA1P01562 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.63□□□□□ -0.55
IFNA1P01562 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms