Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
IDH3BO43837 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.58□□□□□ -0.24
IDH3BO43837 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
IDH3BO43837 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.58□□□□□ -0.24
IDH3BO43837 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IDH3BO43837 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.57□□□□□ -0.24
IDH3BO43837 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.57□□□□□ -0.24
IDH3BO43837 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
IDH3BO43837 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IDH3BO43837 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IDH3BO43837 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.57□□□□□ -0.24
IDH3BO43837 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.57□□□□□ -0.24
IDH3BO43837 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IDH3BO43837 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IDH3BO43837 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
IDH3BO43837 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.57□□□□□ -0.24
IDH3BO43837 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.57□□□□□ -0.24
IDH3BO43837 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.57□□□□□ -0.24
IDH3BO43837 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.57□□□□□ -0.24
IDH3BO43837 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
IDH3BO43837 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
IDH3BO43837 AP001160.2-201ENST00000596071 487 ntBASIC13.57□□□□□ -0.24
IDH3BO43837 AL049840.4-201ENST00000602422 811 ntBASIC13.57□□□□□ -0.24
IDH3BO43837 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.57□□□□□ -0.24
IDH3BO43837 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IDH3BO43837 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 AC130686.1-201ENST00000622936 2466 ntBASIC13.57□□□□□ -0.24
IDH3BO43837 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.57□□□□□ -0.24
IDH3BO43837 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 AC022144.1-201ENST00000602255 1580 ntBASIC13.57□□□□□ -0.24
IDH3BO43837 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.57□□□□□ -0.24
IDH3BO43837 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IDH3BO43837 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 AL354702.1-201ENST00000442006 1960 ntBASIC13.56□□□□□ -0.24
IDH3BO43837 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.56□□□□□ -0.24
IDH3BO43837 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
IDH3BO43837 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
IDH3BO43837 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
IDH3BO43837 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.56□□□□□ -0.24
IDH3BO43837 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.56□□□□□ -0.24
IDH3BO43837 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms