Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC6Q9UBN7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 AL133499.1-201ENST00000596207 608 ntBASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 AF254983.2-201ENST00000612331 135 ntBASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 AL138725.1-201ENST00000407347 1314 ntBASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.59■□□□□ 0.25
HDAC6Q9UBN7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HDAC6Q9UBN7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 AC079781.5-202ENST00000641784 3743 ntBASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 PUDPP3-201ENST00000445368 636 ntBASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 AC125604.1-201ENST00000496255 707 ntBASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 AL161670.2-201ENST00000557650 1227 ntBASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 MIR4706-201ENST00000582134 82 ntBASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 AL136295.7-201ENST00000619226 1200 ntBASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 AC079336.7-201ENST00000623428 1078 ntBASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms