Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 TMEM198B-204ENST00000484016 896 ntBASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 PCDHA3-202ENST00000532566 4594 ntBASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 PGAM1P5-201ENST00000548011 764 ntBASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 MIR4722-201ENST00000578292 60 ntBASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 MIR6769A-201ENST00000617340 73 ntBASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SLC38A9Q8NBW4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 AHCYP4-201ENST00000419201 1315 ntBASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 FRMPD2B-201ENST00000431305 1347 ntBASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 ST13P19-201ENST00000442505 1124 ntBASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 FTLP1-201ENST00000449155 526 ntBASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 RN7SL258P-201ENST00000478664 300 ntBASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 AL353726.2-201ENST00000623259 884 ntBASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SLC38A9Q8NBW4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 MTHFR-210ENST00000641407 2387 ntBASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC38A9Q8NBW4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms