Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 RPL13AP25-201ENST00000484130 612 ntBASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 AC092364.2-202ENST00000597012 1073 ntBASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 AC008761.3-201ENST00000624803 892 ntBASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 AL357140.3-201ENST00000639753 1983 ntBASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
TMEM53Q6P2H8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM53Q6P2H8 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 AC002472.2-201ENST00000442739 958 ntBASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 SPTLC1P1-201ENST00000447199 261 ntBASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 FAM86LP-201ENST00000478302 853 ntBASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 TERF1P3-201ENST00000505638 1227 ntBASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 AL132655.2-201ENST00000596276 594 ntBASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 AC007541.1-201ENST00000570282 1469 ntBASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 SLC7A15P-201ENST00000424028 1363 ntBASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM53Q6P2H8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 AC236430.1-201ENST00000402231 743 ntBASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms