Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ERCC6LQ2NKX8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.59■□□□□ 0.09
ERCC6LQ2NKX8 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC15.59■□□□□ 0.09
ERCC6LQ2NKX8 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ERCC6LQ2NKX8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ERCC6LQ2NKX8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ERCC6LQ2NKX8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.58■□□□□ 0.09
ERCC6LQ2NKX8 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ERCC6LQ2NKX8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ERCC6LQ2NKX8 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ERCC6LQ2NKX8 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
ERCC6LQ2NKX8 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 AC092364.2-202ENST00000597012 1073 ntBASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 AC027601.4-201ENST00000611259 610 ntBASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
ERCC6LQ2NKX8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 SLC25A1P1-201ENST00000528351 927 ntBASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 LINC02486-201ENST00000604157 3000 ntBASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 KRT8P12-202ENST00000472924 1397 ntBASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 AC024075.2-201ENST00000598112 1473 ntBASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC6LQ2NKX8 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 AL445250.1-201ENST00000641671 2259 ntBASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms