Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP98P52948 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
NUP98P52948 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP98P52948 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NUP98P52948 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.74■□□□□ 0.43
NUP98P52948 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP98P52948 AC024293.1-201ENST00000467930 498 ntBASIC17.74■□□□□ 0.43
NUP98P52948 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.74■□□□□ 0.43
NUP98P52948 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.74■□□□□ 0.43
NUP98P52948 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.74■□□□□ 0.43
NUP98P52948 AP005264.6-204ENST00000588436 719 ntBASIC17.74■□□□□ 0.43
NUP98P52948 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.74■□□□□ 0.43
NUP98P52948 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUP98P52948 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP98P52948 FAM90A21P-201ENST00000510875 1396 ntBASIC17.74■□□□□ 0.43
NUP98P52948 FAM90A15P-201ENST00000514465 1395 ntBASIC17.74■□□□□ 0.43
NUP98P52948 FAM90A6P-201ENST00000515148 1394 ntBASIC17.74■□□□□ 0.43
NUP98P52948 FAM90A16P-201ENST00000526662 1395 ntBASIC17.74■□□□□ 0.43
NUP98P52948 FAM90A9P-201ENST00000527940 1395 ntBASIC17.74■□□□□ 0.43
NUP98P52948 FAM90A5P-201ENST00000528738 1395 ntBASIC17.74■□□□□ 0.43
NUP98P52948 FAM90A14P-201ENST00000530386 1395 ntBASIC17.74■□□□□ 0.43
NUP98P52948 FAM90A13P-201ENST00000534703 1395 ntBASIC17.74■□□□□ 0.43
NUP98P52948 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP98P52948 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.74■□□□□ 0.43
NUP98P52948 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP98P52948 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP98P52948 BCL2-203ENST00000589955 5011 ntBASIC17.74■□□□□ 0.43
NUP98P52948 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
NUP98P52948 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.73■□□□□ 0.43
NUP98P52948 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NUP98P52948 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.73■□□□□ 0.43
NUP98P52948 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NUP98P52948 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.73■□□□□ 0.43
NUP98P52948 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.73■□□□□ 0.43
NUP98P52948 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NUP98P52948 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.73■□□□□ 0.43
NUP98P52948 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.73■□□□□ 0.43
NUP98P52948 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.73■□□□□ 0.43
NUP98P52948 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.73■□□□□ 0.43
NUP98P52948 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NUP98P52948 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.73■□□□□ 0.43
NUP98P52948 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUP98P52948 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP98P52948 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NUP98P52948 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP98P52948 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.72■□□□□ 0.43
NUP98P52948 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP98P52948 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.72■□□□□ 0.43
NUP98P52948 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.72■□□□□ 0.43
NUP98P52948 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.72■□□□□ 0.43
NUP98P52948 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.72■□□□□ 0.43
NUP98P52948 AC008972.2-201ENST00000606587 494 ntBASIC17.72■□□□□ 0.43
NUP98P52948 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
NUP98P52948 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NUP98P52948 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NUP98P52948 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 AC021305.1-201ENST00000520656 1514 ntBASIC17.72■□□□□ 0.43
NUP98P52948 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NUP98P52948 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP98P52948 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP98P52948 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP98P52948 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP98P52948 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NUP98P52948 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP98P52948 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.72■□□□□ 0.43
NUP98P52948 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP98P52948 AL359091.4-201ENST00000610052 409 ntBASIC17.72■□□□□ 0.43
NUP98P52948 MIR6746-201ENST00000620971 63 ntBASIC17.72■□□□□ 0.43
NUP98P52948 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP98P52948 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
NUP98P52948 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NUP98P52948 AC012617.1-204ENST00000586340 2305 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms