Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FREM3P0C091 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FREM3P0C091 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.3□□□□□ -0.28
FREM3P0C091 AC139712.1-201ENST00000378256 1875 ntBASIC13.3□□□□□ -0.28
FREM3P0C091 TUBBP5-203ENST00000508529 1334 ntBASIC13.3□□□□□ -0.28
FREM3P0C091 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 FNTAP2-201ENST00000430308 634 ntBASIC13.3□□□□□ -0.28
FREM3P0C091 PUDPP3-201ENST00000445368 636 ntBASIC13.3□□□□□ -0.28
FREM3P0C091 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.3□□□□□ -0.28
FREM3P0C091 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
FREM3P0C091 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.29□□□□□ -0.28
FREM3P0C091 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.29□□□□□ -0.28
FREM3P0C091 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
FREM3P0C091 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
FREM3P0C091 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 AC027601.5-201ENST00000624065 2482 ntBASIC13.29□□□□□ -0.28
FREM3P0C091 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
FREM3P0C091 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
FREM3P0C091 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.29□□□□□ -0.28
FREM3P0C091 CYP46A4P-201ENST00000414953 267 ntBASIC13.29□□□□□ -0.28
FREM3P0C091 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
FREM3P0C091 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
FREM3P0C091 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.29□□□□□ -0.28
FREM3P0C091 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
FREM3P0C091 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.29□□□□□ -0.28
FREM3P0C091 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.29□□□□□ -0.28
FREM3P0C091 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.29□□□□□ -0.28
FREM3P0C091 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
FREM3P0C091 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.29□□□□□ -0.28
FREM3P0C091 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.29□□□□□ -0.28
FREM3P0C091 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
FREM3P0C091 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FREM3P0C091 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.29□□□□□ -0.28
FREM3P0C091 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.29□□□□□ -0.28
FREM3P0C091 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FREM3P0C091 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.28□□□□□ -0.28
FREM3P0C091 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 MIR769-201ENST00000390225 118 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
FREM3P0C091 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
FREM3P0C091 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.28□□□□□ -0.28
FREM3P0C091 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.28□□□□□ -0.28
FREM3P0C091 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.28□□□□□ -0.28
FREM3P0C091 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.28□□□□□ -0.28
FREM3P0C091 AC020914.3-201ENST00000594712 304 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
FREM3P0C091 AL136295.7-201ENST00000619226 1200 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
FREM3P0C091 AC015909.3-201ENST00000572855 1794 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
FREM3P0C091 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
FREM3P0C091 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
FREM3P0C091 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.28□□□□□ -0.28
FREM3P0C091 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms