Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 MIR497HG-202ENST00000572453 3838 ntBASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 IL9RP2-201ENST00000423948 1312 ntBASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 AC023794.5-201ENST00000564380 2157 ntBASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KCNIP3Q9Y2W7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms