Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 RPL37AP1-201ENST00000412502 279 ntBASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 KRT8P12-202ENST00000472924 1397 ntBASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 BANF1P1-201ENST00000553684 263 ntBASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL4Q9C0H6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 AC018665.1-201ENST00000622927 1362 ntBASIC14.27□□□□□ -0.12
KLHL4Q9C0H6 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 MIR661-201ENST00000384842 89 ntBASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 AL079307.3-201ENST00000556114 283 ntBASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 TEX28P1-201ENST00000613479 1221 ntBASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 TEX28P2-201ENST00000617764 1221 ntBASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.27□□□□□ -0.13
KLHL4Q9C0H6 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
KLHL4Q9C0H6 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms