Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFI1Q99684 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFI1Q99684 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.65□□□□□ -0.38
GFI1Q99684 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFI1Q99684 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.65□□□□□ -0.38
GFI1Q99684 C1QBPP1-201ENST00000400117 770 ntBASIC12.65□□□□□ -0.38
GFI1Q99684 ACTBP8-201ENST00000403258 1108 ntBASIC12.65□□□□□ -0.38
GFI1Q99684 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.65□□□□□ -0.38
GFI1Q99684 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.65□□□□□ -0.38
GFI1Q99684 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.65□□□□□ -0.38
GFI1Q99684 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.65□□□□□ -0.38
GFI1Q99684 TPRX2P-201ENST00000535362 881 ntBASIC12.65□□□□□ -0.38
GFI1Q99684 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFI1Q99684 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.65□□□□□ -0.38
GFI1Q99684 SNHG9-202ENST00000564014 471 ntBASIC12.65□□□□□ -0.38
GFI1Q99684 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.65□□□□□ -0.38
GFI1Q99684 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.65□□□□□ -0.38
GFI1Q99684 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.65□□□□□ -0.38
GFI1Q99684 BX088702.1-201ENST00000610784 235 ntBASIC12.65□□□□□ -0.38
GFI1Q99684 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
GFI1Q99684 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.65□□□□□ -0.38
GFI1Q99684 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GFI1Q99684 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.65□□□□□ -0.38
GFI1Q99684 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.65□□□□□ -0.38
GFI1Q99684 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFI1Q99684 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFI1Q99684 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GFI1Q99684 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFI1Q99684 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.65□□□□□ -0.38
GFI1Q99684 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.65□□□□□ -0.38
GFI1Q99684 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.65□□□□□ -0.38
GFI1Q99684 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
GFI1Q99684 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.65□□□□□ -0.39
GFI1Q99684 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.65□□□□□ -0.39
GFI1Q99684 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
GFI1Q99684 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GFI1Q99684 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.64□□□□□ -0.39
GFI1Q99684 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GFI1Q99684 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GFI1Q99684 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
GFI1Q99684 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
GFI1Q99684 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 SBF1P1-201ENST00000444527 5631 ntBASIC12.64□□□□□ -0.39
GFI1Q99684 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.64□□□□□ -0.39
GFI1Q99684 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
GFI1Q99684 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.64□□□□□ -0.39
GFI1Q99684 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.64□□□□□ -0.39
GFI1Q99684 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.64□□□□□ -0.39
GFI1Q99684 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GFI1Q99684 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.64□□□□□ -0.39
GFI1Q99684 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
GFI1Q99684 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms