Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC021305.1-201ENST00000520656 1514 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 BRD7P5-201ENST00000299197 1822 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 RN7SL23P-201ENST00000484055 275 ntBASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 AC244250.3-201ENST00000620749 366 ntBASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 AC011270.2-201ENST00000624293 2550 ntBASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LYSMD4Q5XG99 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 AC063926.3-201ENST00000624734 5658 ntBASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 AC093909.3-201ENST00000504783 336 ntBASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 RNA5SP406-201ENST00000516106 112 ntBASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 AC226150.1-201ENST00000544259 466 ntBASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 DNM1P51-201ENST00000558149 522 ntBASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 RN7SL596P-201ENST00000582123 288 ntBASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms