Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.68□□□□□ -0.54
IFNA1P01562 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
IFNA1P01562 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
IFNA1P01562 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
IFNA1P01562 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.67□□□□□ -0.54
IFNA1P01562 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.67□□□□□ -0.54
IFNA1P01562 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
IFNA1P01562 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.67□□□□□ -0.54
IFNA1P01562 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.67□□□□□ -0.54
IFNA1P01562 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.67□□□□□ -0.54
IFNA1P01562 TARDBPP1-201ENST00000442013 1203 ntBASIC11.67□□□□□ -0.54
IFNA1P01562 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.67□□□□□ -0.54
IFNA1P01562 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.67□□□□□ -0.54
IFNA1P01562 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 AC087388.1-201ENST00000571370 1112 ntBASIC11.67□□□□□ -0.54
IFNA1P01562 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
IFNA1P01562 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.67□□□□□ -0.54
IFNA1P01562 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 AP000550.4-202ENST00000639755 178 ntBASIC11.67□□□□□ -0.54
IFNA1P01562 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.67□□□□□ -0.54
IFNA1P01562 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 AL445209.1-201ENST00000607269 3491 ntBASIC11.67□□□□□ -0.54
IFNA1P01562 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
IFNA1P01562 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
IFNA1P01562 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.67□□□□□ -0.54
IFNA1P01562 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 AC009474.1-201ENST00000455096 1565 ntBASIC11.67□□□□□ -0.54
IFNA1P01562 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.67□□□□□ -0.54
IFNA1P01562 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IFNA1P01562 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
IFNA1P01562 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
IFNA1P01562 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
IFNA1P01562 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.66□□□□□ -0.54
IFNA1P01562 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
IFNA1P01562 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IFNA1P01562 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms