Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.54□□□□□ -0.56
ZNF253O75346 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.54□□□□□ -0.56
ZNF253O75346 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.54□□□□□ -0.56
ZNF253O75346 CNN2P2-201ENST00000443536 909 ntBASIC11.54□□□□□ -0.56
ZNF253O75346 CNN2P3-201ENST00000450201 906 ntBASIC11.54□□□□□ -0.56
ZNF253O75346 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.54□□□□□ -0.56
ZNF253O75346 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.54□□□□□ -0.56
ZNF253O75346 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.54□□□□□ -0.56
ZNF253O75346 GAPDHP40-201ENST00000505218 1006 ntBASIC11.54□□□□□ -0.56
ZNF253O75346 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.54□□□□□ -0.56
ZNF253O75346 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.54□□□□□ -0.56
ZNF253O75346 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.54□□□□□ -0.56
ZNF253O75346 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.54□□□□□ -0.56
ZNF253O75346 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.54□□□□□ -0.56
ZNF253O75346 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
ZNF253O75346 AC092337.1-201ENST00000568699 1129 ntBASIC11.54□□□□□ -0.56
ZNF253O75346 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.54□□□□□ -0.56
ZNF253O75346 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.54□□□□□ -0.56
ZNF253O75346 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.54□□□□□ -0.56
ZNF253O75346 AL136317.3-201ENST00000618497 906 ntBASIC11.54□□□□□ -0.56
ZNF253O75346 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.54□□□□□ -0.56
ZNF253O75346 AL109936.8-201ENST00000641772 604 ntBASIC11.54□□□□□ -0.56
ZNF253O75346 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.54□□□□□ -0.56
ZNF253O75346 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ZNF253O75346 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 TUBB3P1-201ENST00000405796 1332 ntBASIC11.54□□□□□ -0.56
ZNF253O75346 AC087499.5-201ENST00000452760 1342 ntBASIC11.54□□□□□ -0.56
ZNF253O75346 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.54□□□□□ -0.56
ZNF253O75346 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ZNF253O75346 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
ZNF253O75346 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ZNF253O75346 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 MIR497HG-202ENST00000572453 3838 ntBASIC11.53□□□□□ -0.56
ZNF253O75346 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.53□□□□□ -0.56
ZNF253O75346 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ZNF253O75346 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 AC211486.1-202ENST00000416371 468 ntBASIC11.53□□□□□ -0.56
ZNF253O75346 UPF3AP3-201ENST00000420996 769 ntBASIC11.53□□□□□ -0.56
ZNF253O75346 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.53□□□□□ -0.56
ZNF253O75346 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.53□□□□□ -0.56
ZNF253O75346 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.53□□□□□ -0.56
ZNF253O75346 AC211476.1-201ENST00000503899 468 ntBASIC11.53□□□□□ -0.56
ZNF253O75346 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.53□□□□□ -0.56
ZNF253O75346 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
ZNF253O75346 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.53□□□□□ -0.56
ZNF253O75346 AL138828.2-201ENST00000615812 383 ntBASIC11.53□□□□□ -0.56
ZNF253O75346 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.53□□□□□ -0.56
ZNF253O75346 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms