Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLDN5O00501 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
CLDN5O00501 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.44■□□□□ 0.06
CLDN5O00501 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN5O00501 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN5O00501 ACTG1P2-201ENST00000415776 1125 ntBASIC15.44■□□□□ 0.06
CLDN5O00501 BCYRN1-201ENST00000418539 200 ntBASIC15.44■□□□□ 0.06
CLDN5O00501 ACTG1P11-201ENST00000425411 1125 ntBASIC15.44■□□□□ 0.06
CLDN5O00501 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.44■□□□□ 0.06
CLDN5O00501 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN5O00501 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN5O00501 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN5O00501 AC009779.1-201ENST00000551138 283 ntBASIC15.44■□□□□ 0.06
CLDN5O00501 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.44■□□□□ 0.06
CLDN5O00501 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.44■□□□□ 0.06
CLDN5O00501 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.44■□□□□ 0.06
CLDN5O00501 AP000346.4-201ENST00000614827 381 ntBASIC15.44■□□□□ 0.06
CLDN5O00501 AL136295.7-201ENST00000619226 1200 ntBASIC15.44■□□□□ 0.06
CLDN5O00501 AC133540.1-201ENST00000620845 1019 ntBASIC15.44■□□□□ 0.06
CLDN5O00501 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
CLDN5O00501 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN5O00501 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CLDN5O00501 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN5O00501 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLDN5O00501 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN5O00501 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN5O00501 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN5O00501 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN5O00501 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN5O00501 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 AC011498.7-201ENST00000624986 2027 ntBASIC15.43■□□□□ 0.06
CLDN5O00501 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CLDN5O00501 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.43■□□□□ 0.06
CLDN5O00501 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 AC125604.1-201ENST00000496255 707 ntBASIC15.43■□□□□ 0.06
CLDN5O00501 RCC2P8-201ENST00000502779 1035 ntBASIC15.43■□□□□ 0.06
CLDN5O00501 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN5O00501 AC027237.1-201ENST00000560942 655 ntBASIC15.43■□□□□ 0.06
CLDN5O00501 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.43■□□□□ 0.06
CLDN5O00501 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 AL132994.2-201ENST00000603120 687 ntBASIC15.43■□□□□ 0.06
CLDN5O00501 AC092299.1-201ENST00000632679 757 ntBASIC15.43■□□□□ 0.06
CLDN5O00501 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
CLDN5O00501 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN5O00501 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CLDN5O00501 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CLDN5O00501 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN5O00501 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CLDN5O00501 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms