Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 RN7SL288P-201ENST00000490496 291 ntBASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 AGGF1P1-201ENST00000509500 2073 ntBASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 IGHV1-12-201ENST00000518307 205 ntBASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 AL591122.2-201ENST00000624125 1853 ntBASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 AL590235.1-201ENST00000564650 861 ntBASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 AL133467.4-201ENST00000602953 725 ntBASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 AP000769.1-203ENST00000637245 208 ntBASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCH2Q9Y6C5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 BCL2L12P1-201ENST00000508390 733 ntBASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.3■□□□□ 0.2
PTCH2Q9Y6C5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms