Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 AL133267.1-201ENST00000398220 340 ntBASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 SLC25A1P1-201ENST00000528351 927 ntBASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 KRT126P-201ENST00000549467 1181 ntBASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.61□□□□□ -0.55
RPH3ALQ9UNE2 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 RN7SL828P-201ENST00000607615 303 ntBASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.6□□□□□ -0.55
RPH3ALQ9UNE2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms