Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA5Q96FF9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.86■□□□□ 0.29
CDCA5Q96FF9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA5Q96FF9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA5Q96FF9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.86■□□□□ 0.29
CDCA5Q96FF9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA5Q96FF9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 AL365203.3-201ENST00000609742 2057 ntBASIC16.85■□□□□ 0.29
CDCA5Q96FF9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 ODCP-201ENST00000459650 1639 ntBASIC16.85■□□□□ 0.29
CDCA5Q96FF9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 BRI3P1-201ENST00000440440 378 ntBASIC16.85■□□□□ 0.29
CDCA5Q96FF9 RPL3P5-201ENST00000441645 1232 ntBASIC16.85■□□□□ 0.29
CDCA5Q96FF9 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 RN7SL288P-201ENST00000490496 291 ntBASIC16.85■□□□□ 0.29
CDCA5Q96FF9 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 AC091769.1-201ENST00000619576 568 ntBASIC16.85■□□□□ 0.29
CDCA5Q96FF9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CDCA5Q96FF9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 NHP2P1-201ENST00000335274 462 ntBASIC16.84■□□□□ 0.29
CDCA5Q96FF9 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 LINC00265-2P-201ENST00000413372 782 ntBASIC16.84■□□□□ 0.29
CDCA5Q96FF9 AL512599.1-201ENST00000430724 685 ntBASIC16.84■□□□□ 0.29
CDCA5Q96FF9 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 AC005740.1-201ENST00000515639 522 ntBASIC16.84■□□□□ 0.29
CDCA5Q96FF9 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.84■□□□□ 0.29
CDCA5Q96FF9 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms