Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
DDX1Q92499 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
DDX1Q92499 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.62■□□□□ 0.09
DDX1Q92499 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.62■□□□□ 0.09
DDX1Q92499 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.62■□□□□ 0.09
DDX1Q92499 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.62■□□□□ 0.09
DDX1Q92499 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.62■□□□□ 0.09
DDX1Q92499 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.62■□□□□ 0.09
DDX1Q92499 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.62■□□□□ 0.09
DDX1Q92499 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.62■□□□□ 0.09
DDX1Q92499 PPY2P-201ENST00000582808 702 ntBASIC15.62■□□□□ 0.09
DDX1Q92499 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.62■□□□□ 0.09
DDX1Q92499 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.62■□□□□ 0.09
DDX1Q92499 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
DDX1Q92499 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DDX1Q92499 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 AC005840.4-201ENST00000541242 2494 ntBASIC15.61■□□□□ 0.09
DDX1Q92499 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.61■□□□□ 0.09
DDX1Q92499 AC009093.10-201ENST00000641956 1442 ntBASIC15.61■□□□□ 0.09
DDX1Q92499 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DDX1Q92499 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.61■□□□□ 0.09
DDX1Q92499 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
DDX1Q92499 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.61■□□□□ 0.09
DDX1Q92499 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
DDX1Q92499 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
DDX1Q92499 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.61■□□□□ 0.09
DDX1Q92499 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.61■□□□□ 0.09
DDX1Q92499 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.61■□□□□ 0.09
DDX1Q92499 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.61■□□□□ 0.09
DDX1Q92499 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.61■□□□□ 0.09
DDX1Q92499 AC027601.3-201ENST00000622907 509 ntBASIC15.61■□□□□ 0.09
DDX1Q92499 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
DDX1Q92499 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.61■□□□□ 0.09
DDX1Q92499 AC011474.4-201ENST00000623523 2076 ntBASIC15.61■□□□□ 0.09
DDX1Q92499 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.61■□□□□ 0.09
DDX1Q92499 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.61■□□□□ 0.09
DDX1Q92499 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DDX1Q92499 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.61■□□□□ 0.09
DDX1Q92499 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
DDX1Q92499 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.61■□□□□ 0.09
DDX1Q92499 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DDX1Q92499 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
DDX1Q92499 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.6■□□□□ 0.09
DDX1Q92499 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.6■□□□□ 0.09
DDX1Q92499 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
DDX1Q92499 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms