Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
FAM90A1Q86YD7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 HSPA7-201ENST00000445535 1927 ntBASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 KRT8P28-201ENST00000433288 1390 ntBASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 FAM58BP-201ENST00000439056 645 ntBASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 CICP12-201ENST00000455801 843 ntBASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 RPSAP36-202ENST00000494591 1261 ntBASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 RN7SL832P-201ENST00000607781 1756 ntBASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 E2F3P2-201ENST00000447755 1422 ntBASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM90A1Q86YD7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A1Q86YD7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms