Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PDX1P52945 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.3□□□□□ -0.12
PDX1P52945 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PDX1P52945 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.3□□□□□ -0.12
PDX1P52945 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.3□□□□□ -0.12
PDX1P52945 CEP164P1-201ENST00000455142 418 ntBASIC14.3□□□□□ -0.12
PDX1P52945 LDHBP1-201ENST00000455730 1119 ntBASIC14.3□□□□□ -0.12
PDX1P52945 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PDX1P52945 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.3□□□□□ -0.12
PDX1P52945 HLA-J-204ENST00000495278 958 ntBASIC14.3□□□□□ -0.12
PDX1P52945 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
PDX1P52945 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.3□□□□□ -0.12
PDX1P52945 AC009779.1-201ENST00000551138 283 ntBASIC14.3□□□□□ -0.12
PDX1P52945 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.3□□□□□ -0.12
PDX1P52945 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.3□□□□□ -0.12
PDX1P52945 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.3□□□□□ -0.12
PDX1P52945 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.3□□□□□ -0.12
PDX1P52945 AL132994.2-201ENST00000603120 687 ntBASIC14.3□□□□□ -0.12
PDX1P52945 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
PDX1P52945 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.3□□□□□ -0.12
PDX1P52945 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.3□□□□□ -0.12
PDX1P52945 AC099063.4-201ENST00000641099 1602 ntBASIC14.3□□□□□ -0.12
PDX1P52945 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PDX1P52945 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.29□□□□□ -0.12
PDX1P52945 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.29□□□□□ -0.12
PDX1P52945 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.29□□□□□ -0.12
PDX1P52945 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PDX1P52945 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.29□□□□□ -0.12
PDX1P52945 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.29□□□□□ -0.12
PDX1P52945 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.29□□□□□ -0.12
PDX1P52945 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.29□□□□□ -0.12
PDX1P52945 AC069218.1-201ENST00000435269 762 ntBASIC14.29□□□□□ -0.12
PDX1P52945 AC253536.4-201ENST00000440539 267 ntBASIC14.29□□□□□ -0.12
PDX1P52945 RCC2P8-201ENST00000502779 1035 ntBASIC14.29□□□□□ -0.12
PDX1P52945 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.29□□□□□ -0.12
PDX1P52945 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.29□□□□□ -0.12
PDX1P52945 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PDX1P52945 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.29□□□□□ -0.12
PDX1P52945 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.29□□□□□ -0.12
PDX1P52945 AL136295.7-201ENST00000619226 1200 ntBASIC14.29□□□□□ -0.12
PDX1P52945 AL138725.1-201ENST00000407347 1314 ntBASIC14.29□□□□□ -0.12
PDX1P52945 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 AC006480.2-201ENST00000609770 1337 ntBASIC14.29□□□□□ -0.12
PDX1P52945 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PDX1P52945 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDX1P52945 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PDX1P52945 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 AC244394.1-201ENST00000435000 1665 ntBASIC14.29□□□□□ -0.12
PDX1P52945 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.29□□□□□ -0.12
PDX1P52945 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDX1P52945 MBLAC2-202ENST00000514906 1936 ntBASIC14.29□□□□□ -0.12
PDX1P52945 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDX1P52945 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms