Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.47□□□□□ -0.25
CENPAP49450 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.46□□□□□ -0.25
CENPAP49450 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CENPAP49450 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
CENPAP49450 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.46□□□□□ -0.25
CENPAP49450 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
CENPAP49450 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.46□□□□□ -0.25
CENPAP49450 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
CENPAP49450 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CENPAP49450 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.46□□□□□ -0.25
CENPAP49450 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 RNA5SP421-201ENST00000516864 134 ntBASIC13.46□□□□□ -0.25
CENPAP49450 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.46□□□□□ -0.25
CENPAP49450 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.46□□□□□ -0.25
CENPAP49450 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.46□□□□□ -0.25
CENPAP49450 AC006538.3-201ENST00000612495 578 ntBASIC13.46□□□□□ -0.25
CENPAP49450 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.46□□□□□ -0.25
CENPAP49450 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.46□□□□□ -0.25
CENPAP49450 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CENPAP49450 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CENPAP49450 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.46□□□□□ -0.25
CENPAP49450 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CENPAP49450 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CENPAP49450 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.46□□□□□ -0.26
CENPAP49450 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.46□□□□□ -0.26
CENPAP49450 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.45□□□□□ -0.26
CENPAP49450 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.45□□□□□ -0.26
CENPAP49450 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CENPAP49450 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.45□□□□□ -0.26
CENPAP49450 MRPS18AP1-201ENST00000414458 589 ntBASIC13.45□□□□□ -0.26
CENPAP49450 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.45□□□□□ -0.26
CENPAP49450 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.45□□□□□ -0.26
CENPAP49450 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.45□□□□□ -0.26
CENPAP49450 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.45□□□□□ -0.26
CENPAP49450 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms