Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC5P40937 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC5P40937 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC5P40937 AC023908.3-201ENST00000564211 3047 ntBASIC16.2■□□□□ 0.18
RFC5P40937 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RFC5P40937 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.2■□□□□ 0.18
RFC5P40937 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC5P40937 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC5P40937 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RFC5P40937 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC5P40937 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC5P40937 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC5P40937 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC5P40937 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC5P40937 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC5P40937 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RFC5P40937 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.19■□□□□ 0.18
RFC5P40937 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RFC5P40937 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RFC5P40937 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.19■□□□□ 0.18
RFC5P40937 SPTLC1P5-201ENST00000450718 252 ntBASIC16.19■□□□□ 0.18
RFC5P40937 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.19■□□□□ 0.18
RFC5P40937 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.19■□□□□ 0.18
RFC5P40937 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.19■□□□□ 0.18
RFC5P40937 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.19■□□□□ 0.18
RFC5P40937 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.19■□□□□ 0.18
RFC5P40937 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFC5P40937 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC5P40937 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC5P40937 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
RFC5P40937 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFC5P40937 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 AC026748.1-201ENST00000624349 3251 ntBASIC16.18■□□□□ 0.18
RFC5P40937 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.18■□□□□ 0.18
RFC5P40937 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RFC5P40937 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.18■□□□□ 0.18
RFC5P40937 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RFC5P40937 CYP46A4P-201ENST00000414953 267 ntBASIC16.18■□□□□ 0.18
RFC5P40937 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.18■□□□□ 0.18
RFC5P40937 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.18■□□□□ 0.18
RFC5P40937 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.18■□□□□ 0.18
RFC5P40937 TPT1P11-201ENST00000458482 498 ntBASIC16.18■□□□□ 0.18
RFC5P40937 AC022447.6-201ENST00000515522 438 ntBASIC16.18■□□□□ 0.18
RFC5P40937 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.18■□□□□ 0.18
RFC5P40937 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.18■□□□□ 0.18
RFC5P40937 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.18■□□□□ 0.18
RFC5P40937 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.18■□□□□ 0.18
RFC5P40937 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.18■□□□□ 0.18
RFC5P40937 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.18■□□□□ 0.18
RFC5P40937 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RFC5P40937 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms