Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AP005264.6-204ENST00000588436 719 ntBASIC18.21■□□□□ 0.51
RFC4P35249 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RFC4P35249 MIR6746-201ENST00000620971 63 ntBASIC18.21■□□□□ 0.51
RFC4P35249 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RFC4P35249 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.21■□□□□ 0.51
RFC4P35249 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RFC4P35249 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RFC4P35249 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RFC4P35249 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC4P35249 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 AL672207.1-201ENST00000328462 1570 ntBASIC18.21■□□□□ 0.51
RFC4P35249 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RFC4P35249 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC4P35249 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RFC4P35249 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RFC4P35249 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.2■□□□□ 0.5
RFC4P35249 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.2■□□□□ 0.5
RFC4P35249 AC108734.2-201ENST00000420887 1069 ntBASIC18.2■□□□□ 0.5
RFC4P35249 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.2■□□□□ 0.5
RFC4P35249 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.2■□□□□ 0.5
RFC4P35249 AC244197.1-201ENST00000456494 951 ntBASIC18.2■□□□□ 0.5
RFC4P35249 AC093826.1-201ENST00000508655 993 ntBASIC18.2■□□□□ 0.5
RFC4P35249 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.2■□□□□ 0.5
RFC4P35249 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.2■□□□□ 0.5
RFC4P35249 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RFC4P35249 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RFC4P35249 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC18.2■□□□□ 0.5
RFC4P35249 AC010976.2-201ENST00000609697 852 ntBASIC18.2■□□□□ 0.5
RFC4P35249 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RFC4P35249 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.2■□□□□ 0.5
RFC4P35249 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.2■□□□□ 0.5
RFC4P35249 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC4P35249 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.19■□□□□ 0.5
RFC4P35249 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.19■□□□□ 0.5
RFC4P35249 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RFC4P35249 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.19■□□□□ 0.5
RFC4P35249 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.19■□□□□ 0.5
RFC4P35249 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.19■□□□□ 0.5
RFC4P35249 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.19■□□□□ 0.5
RFC4P35249 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RFC4P35249 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 AC095040.1-201ENST00000513286 675 ntBASIC18.19■□□□□ 0.5
RFC4P35249 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.19■□□□□ 0.5
RFC4P35249 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.19■□□□□ 0.5
RFC4P35249 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.19■□□□□ 0.5
RFC4P35249 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.19■□□□□ 0.5
RFC4P35249 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFC4P35249 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC18.19■□□□□ 0.5
RFC4P35249 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
RFC4P35249 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RFC4P35249 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC4P35249 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RFC4P35249 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.18■□□□□ 0.5
RFC4P35249 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RFC4P35249 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms