Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 TPT1P11-201ENST00000458482 498 ntBASIC14.32□□□□□ -0.12
LINGO3P0C6S8 INGX-202ENST00000489074 768 ntBASIC14.32□□□□□ -0.12
LINGO3P0C6S8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.32□□□□□ -0.12
LINGO3P0C6S8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 RPL5P21-201ENST00000404620 815 ntBASIC14.31□□□□□ -0.12
LINGO3P0C6S8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 LINC01115-203ENST00000606068 577 ntBASIC14.31□□□□□ -0.12
LINGO3P0C6S8 AC004461.2-201ENST00000629517 803 ntBASIC14.31□□□□□ -0.12
LINGO3P0C6S8 AC004840.1-201ENST00000636359 365 ntBASIC14.31□□□□□ -0.12
LINGO3P0C6S8 AC067750.1-201ENST00000608826 6545 ntBASIC14.31□□□□□ -0.12
LINGO3P0C6S8 AC015819.3-201ENST00000624305 2674 ntBASIC14.31□□□□□ -0.12
LINGO3P0C6S8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINGO3P0C6S8 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms