Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV3P03979 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV3P03979 SNX29P1-201ENST00000548357 1007 ntBASIC11.64□□□□□ -0.55
TRGV3P03979 RN7SL713P-201ENST00000582127 302 ntBASIC11.64□□□□□ -0.55
TRGV3P03979 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV3P03979 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV3P03979 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV3P03979 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV3P03979 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.64□□□□□ -0.55
TRGV3P03979 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV3P03979 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV3P03979 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 AC092135.3-201ENST00000624151 1846 ntBASIC11.63□□□□□ -0.55
TRGV3P03979 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
TRGV3P03979 AP000593.2-201ENST00000542775 1433 ntBASIC11.63□□□□□ -0.55
TRGV3P03979 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV3P03979 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 RN7SKP175-201ENST00000408472 289 ntBASIC11.63□□□□□ -0.55
TRGV3P03979 AC026954.1-201ENST00000429771 1293 ntBASIC11.63□□□□□ -0.55
TRGV3P03979 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 HOMER2P2-201ENST00000451621 847 ntBASIC11.63□□□□□ -0.55
TRGV3P03979 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV3P03979 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.63□□□□□ -0.55
TRGV3P03979 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV3P03979 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV3P03979 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV3P03979 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
TRGV3P03979 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.63□□□□□ -0.55
TRGV3P03979 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
TRGV3P03979 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 AL390755.1-201ENST00000623716 2027 ntBASIC11.63□□□□□ -0.55
TRGV3P03979 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV3P03979 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV3P03979 INE2-201ENST00000630399 1874 ntBASIC11.63□□□□□ -0.55
TRGV3P03979 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV3P03979 KRT8P4-201ENST00000509735 1454 ntBASIC11.63□□□□□ -0.55
TRGV3P03979 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
TRGV3P03979 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV3P03979 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV3P03979 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.62□□□□□ -0.55
TRGV3P03979 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV3P03979 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
TRGV3P03979 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV3P03979 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV3P03979 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV3P03979 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV3P03979 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV3P03979 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV3P03979 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV3P03979 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms