Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CILPO75339 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
CILPO75339 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.52■□□□□ 0.08
CILPO75339 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.52■□□□□ 0.08
CILPO75339 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.52■□□□□ 0.08
CILPO75339 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.52■□□□□ 0.08
CILPO75339 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CILPO75339 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.52■□□□□ 0.08
CILPO75339 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.52■□□□□ 0.08
CILPO75339 AC006033.1-201ENST00000440505 426 ntBASIC15.52■□□□□ 0.08
CILPO75339 ST13P19-201ENST00000442505 1124 ntBASIC15.52■□□□□ 0.08
CILPO75339 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CILPO75339 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.52■□□□□ 0.08
CILPO75339 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.52■□□□□ 0.08
CILPO75339 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 AC103810.3-201ENST00000583567 96 ntBASIC15.52■□□□□ 0.08
CILPO75339 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CILPO75339 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.52■□□□□ 0.08
CILPO75339 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.52■□□□□ 0.08
CILPO75339 AL022328.3-201ENST00000607943 679 ntBASIC15.52■□□□□ 0.08
CILPO75339 AC104506.1-201ENST00000609247 429 ntBASIC15.52■□□□□ 0.08
CILPO75339 AC133540.1-201ENST00000620845 1019 ntBASIC15.52■□□□□ 0.08
CILPO75339 AC068587.10-201ENST00000641210 219 ntBASIC15.52■□□□□ 0.08
CILPO75339 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.52■□□□□ 0.08
CILPO75339 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CILPO75339 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
CILPO75339 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CILPO75339 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.52■□□□□ 0.07
CILPO75339 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CILPO75339 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.52■□□□□ 0.07
CILPO75339 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CILPO75339 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CILPO75339 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CILPO75339 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CILPO75339 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CILPO75339 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CILPO75339 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 AC026748.1-201ENST00000624349 3251 ntBASIC15.51■□□□□ 0.07
CILPO75339 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.51■□□□□ 0.07
CILPO75339 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 AC104073.2-201ENST00000453737 312 ntBASIC15.51■□□□□ 0.07
CILPO75339 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.51■□□□□ 0.07
CILPO75339 AC099548.2-209ENST00000480264 625 ntBASIC15.51■□□□□ 0.07
CILPO75339 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.51■□□□□ 0.07
CILPO75339 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 RN7SL163P-201ENST00000583100 276 ntBASIC15.51■□□□□ 0.07
CILPO75339 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.51■□□□□ 0.07
CILPO75339 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.51■□□□□ 0.07
CILPO75339 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.51■□□□□ 0.07
CILPO75339 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CILPO75339 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CILPO75339 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.51■□□□□ 0.07
CILPO75339 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CILPO75339 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms