Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CACNA1FO60840 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC18.08■□□□□ 0.48
CACNA1FO60840 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CACNA1FO60840 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC18.08■□□□□ 0.48
CACNA1FO60840 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1FO60840 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1FO60840 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1FO60840 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.08■□□□□ 0.48
CACNA1FO60840 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1FO60840 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CACNA1FO60840 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1FO60840 AL627422.1-201ENST00000434104 580 ntBASIC18.08■□□□□ 0.48
CACNA1FO60840 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CACNA1FO60840 MAGEA5-201ENST00000446757 942 ntBASIC18.08■□□□□ 0.48
CACNA1FO60840 DUX4L50-201ENST00000455245 715 ntBASIC18.08■□□□□ 0.48
CACNA1FO60840 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.08■□□□□ 0.48
CACNA1FO60840 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC18.08■□□□□ 0.48
CACNA1FO60840 AC005632.3-201ENST00000605544 308 ntBASIC18.08■□□□□ 0.48
CACNA1FO60840 AC128714.1-201ENST00000637035 887 ntBASIC18.08■□□□□ 0.48
CACNA1FO60840 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CACNA1FO60840 RCC2P1-201ENST00000452257 1476 ntBASIC18.07■□□□□ 0.48
CACNA1FO60840 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1FO60840 FMO6P-201ENST00000236166 1620 ntBASIC18.07■□□□□ 0.48
CACNA1FO60840 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1FO60840 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.07■□□□□ 0.48
CACNA1FO60840 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1FO60840 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC18.07■□□□□ 0.48
CACNA1FO60840 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1FO60840 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
CACNA1FO60840 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.07■□□□□ 0.48
CACNA1FO60840 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.07■□□□□ 0.48
CACNA1FO60840 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.07■□□□□ 0.48
CACNA1FO60840 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CACNA1FO60840 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC18.07■□□□□ 0.48
CACNA1FO60840 LINC01783-202ENST00000614408 828 ntBASIC18.07■□□□□ 0.48
CACNA1FO60840 BX284668.2-205ENST00000619677 828 ntBASIC18.07■□□□□ 0.48
CACNA1FO60840 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1FO60840 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.07■□□□□ 0.48
CACNA1FO60840 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CACNA1FO60840 AC117503.4-201ENST00000623229 1418 ntBASIC18.07■□□□□ 0.48
CACNA1FO60840 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1FO60840 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1FO60840 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1FO60840 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1FO60840 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.06■□□□□ 0.48
CACNA1FO60840 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.06■□□□□ 0.48
CACNA1FO60840 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1FO60840 TMEM198B-204ENST00000484016 896 ntBASIC18.06■□□□□ 0.48
CACNA1FO60840 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1FO60840 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.06■□□□□ 0.48
CACNA1FO60840 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.06■□□□□ 0.48
CACNA1FO60840 AC025262.2-201ENST00000623975 1056 ntBASIC18.06■□□□□ 0.48
CACNA1FO60840 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1FO60840 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1FO60840 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.06■□□□□ 0.48
CACNA1FO60840 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.06■□□□□ 0.48
CACNA1FO60840 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CACNA1FO60840 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 AC005618.3-201ENST00000624928 458 ntBASIC18.06■□□□□ 0.48
CACNA1FO60840 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CACNA1FO60840 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC18.06■□□□□ 0.48
CACNA1FO60840 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 LINC02228-204ENST00000642115 2962 ntBASIC18.05■□□□□ 0.48
CACNA1FO60840 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.05■□□□□ 0.48
CACNA1FO60840 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNA1FO60840 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CACNA1FO60840 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CACNA1FO60840 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNA1FO60840 AC026316.1-201ENST00000398900 414 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms