Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AL161772.1-201ENST00000610494 4412 ntBASIC14.85□□□□□ -0.03
PRAMEF11O60813 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 DPM3-202ENST00000368399 517 ntBASIC14.85□□□□□ -0.03
PRAMEF11O60813 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AC006033.1-201ENST00000440505 426 ntBASIC14.85□□□□□ -0.03
PRAMEF11O60813 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 RN7SL163P-201ENST00000583100 276 ntBASIC14.85□□□□□ -0.03
PRAMEF11O60813 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AC136759.1-202ENST00000530858 2194 ntBASIC14.85□□□□□ -0.03
PRAMEF11O60813 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 PKD1P5-201ENST00000532415 10291 ntBASIC14.85□□□□□ -0.03
PRAMEF11O60813 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
PRAMEF11O60813 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.84□□□□□ -0.03
PRAMEF11O60813 ST13P19-201ENST00000442505 1124 ntBASIC14.84□□□□□ -0.03
PRAMEF11O60813 AC104073.2-201ENST00000453737 312 ntBASIC14.84□□□□□ -0.03
PRAMEF11O60813 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 AC104506.1-201ENST00000609247 429 ntBASIC14.84□□□□□ -0.03
PRAMEF11O60813 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF11O60813 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.84□□□□□ -0.03
PRAMEF11O60813 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PRAMEF11O60813 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.83□□□□□ -0.03
PRAMEF11O60813 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.83□□□□□ -0.03
PRAMEF11O60813 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
PRAMEF11O60813 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
PRAMEF11O60813 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PRAMEF11O60813 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PRAMEF11O60813 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms