Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.83□□□□□ -0.52
UPK2O00526 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.83□□□□□ -0.52
UPK2O00526 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 AC012441.1-201ENST00000446669 685 ntBASIC11.83□□□□□ -0.52
UPK2O00526 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
UPK2O00526 TMEM198B-204ENST00000484016 896 ntBASIC11.83□□□□□ -0.52
UPK2O00526 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.83□□□□□ -0.52
UPK2O00526 ALG3P1-201ENST00000508806 1114 ntBASIC11.83□□□□□ -0.52
UPK2O00526 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.83□□□□□ -0.52
UPK2O00526 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.83□□□□□ -0.52
UPK2O00526 RN7SL48P-201ENST00000579283 293 ntBASIC11.83□□□□□ -0.52
UPK2O00526 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.83□□□□□ -0.52
UPK2O00526 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
UPK2O00526 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
UPK2O00526 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
UPK2O00526 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 HSPA8P5-201ENST00000456928 2069 ntBASIC11.83□□□□□ -0.52
UPK2O00526 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.83□□□□□ -0.52
UPK2O00526 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.83□□□□□ -0.52
UPK2O00526 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 AC134312.5-201ENST00000568031 1313 ntBASIC11.83□□□□□ -0.52
UPK2O00526 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK2O00526 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.83□□□□□ -0.52
UPK2O00526 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK2O00526 CICP16-201ENST00000502609 2813 ntBASIC11.82□□□□□ -0.52
UPK2O00526 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.82□□□□□ -0.52
UPK2O00526 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
UPK2O00526 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
UPK2O00526 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
UPK2O00526 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
UPK2O00526 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
UPK2O00526 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
UPK2O00526 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
UPK2O00526 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 MIR661-201ENST00000384842 89 ntBASIC11.82□□□□□ -0.52
UPK2O00526 PIN1P1-201ENST00000412108 996 ntBASIC11.82□□□□□ -0.52
UPK2O00526 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.82□□□□□ -0.52
UPK2O00526 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.82□□□□□ -0.52
UPK2O00526 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.82□□□□□ -0.52
UPK2O00526 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.82□□□□□ -0.52
UPK2O00526 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 PTP4A1P2-201ENST00000546033 454 ntBASIC11.82□□□□□ -0.52
UPK2O00526 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.82□□□□□ -0.52
UPK2O00526 WASH4P-201ENST00000564273 1246 ntBASIC11.82□□□□□ -0.52
UPK2O00526 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms