Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 AC009093.2-202ENST00000620513 2079 ntBASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 FKBP4P6-201ENST00000457486 1332 ntBASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 BCYRN1-201ENST00000418539 200 ntBASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 AC106820.3-201ENST00000561653 397 ntBASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPDC1A2A3K4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 AC006504.5-208ENST00000588784 2401 ntBASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 AC079178.1-201ENST00000420915 656 ntBASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 KRT8P13-201ENST00000463294 1010 ntBASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 FTLP10-202ENST00000505798 471 ntBASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPDC1A2A3K4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms