Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.42■■□□□ 1.82
PNMA3Q9UL41 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PNMA3Q9UL41 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.41■■□□□ 1.82
PNMA3Q9UL41 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PNMA3Q9UL41 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.41■■□□□ 1.82
PNMA3Q9UL41 MIR3181-201ENST00000578512 73 ntBASIC26.41■■□□□ 1.82
PNMA3Q9UL41 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PNMA3Q9UL41 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PNMA3Q9UL41 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PNMA3Q9UL41 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PNMA3Q9UL41 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.4■■□□□ 1.82
PNMA3Q9UL41 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.4■■□□□ 1.82
PNMA3Q9UL41 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PNMA3Q9UL41 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PNMA3Q9UL41 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.39■■□□□ 1.82
PNMA3Q9UL41 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.39■■□□□ 1.82
PNMA3Q9UL41 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PNMA3Q9UL41 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PNMA3Q9UL41 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PNMA3Q9UL41 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.38■■□□□ 1.81
PNMA3Q9UL41 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.38■■□□□ 1.81
PNMA3Q9UL41 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PNMA3Q9UL41 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.38■■□□□ 1.81
PNMA3Q9UL41 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PNMA3Q9UL41 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PNMA3Q9UL41 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.37■■□□□ 1.81
PNMA3Q9UL41 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PNMA3Q9UL41 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PNMA3Q9UL41 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PNMA3Q9UL41 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.37■■□□□ 1.81
PNMA3Q9UL41 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.37■■□□□ 1.81
PNMA3Q9UL41 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.37■■□□□ 1.81
PNMA3Q9UL41 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.36■■□□□ 1.81
PNMA3Q9UL41 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.36■■□□□ 1.81
PNMA3Q9UL41 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA3Q9UL41 AC034268.1-201ENST00000441047 882 ntBASIC26.36■■□□□ 1.81
PNMA3Q9UL41 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA3Q9UL41 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.36■■□□□ 1.81
PNMA3Q9UL41 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA3Q9UL41 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA3Q9UL41 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.36■■□□□ 1.81
PNMA3Q9UL41 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 AL161729.1-201ENST00000604104 1402 ntBASIC26.35■■□□□ 1.81
PNMA3Q9UL41 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PNMA3Q9UL41 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 AC126544.1-201ENST00000580842 1059 ntBASIC26.34■■□□□ 1.81
PNMA3Q9UL41 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.34■■□□□ 1.81
PNMA3Q9UL41 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.33■■□□□ 1.81
PNMA3Q9UL41 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PNMA3Q9UL41 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.33■■□□□ 1.81
PNMA3Q9UL41 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.33■■□□□ 1.81
PNMA3Q9UL41 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.33■■□□□ 1.81
PNMA3Q9UL41 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
PNMA3Q9UL41 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
PNMA3Q9UL41 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
PNMA3Q9UL41 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PNMA3Q9UL41 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.31■■□□□ 1.8
PNMA3Q9UL41 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.31■■□□□ 1.8
PNMA3Q9UL41 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PNMA3Q9UL41 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PNMA3Q9UL41 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PNMA3Q9UL41 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
PNMA3Q9UL41 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.3■■□□□ 1.8
PNMA3Q9UL41 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA3Q9UL41 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
PNMA3Q9UL41 pRNA.6-201ENST00000610482 90 ntBASIC26.3■■□□□ 1.8
PNMA3Q9UL41 pRNA.5-201ENST00000612139 90 ntBASIC26.3■■□□□ 1.8
PNMA3Q9UL41 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA3Q9UL41 pRNA.11-201ENST00000618423 90 ntBASIC26.3■■□□□ 1.8
PNMA3Q9UL41 pRNA.13-201ENST00000619112 90 ntBASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms