Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 LINC00543-201ENST00000567234 1845 ntBASIC24.84■■□□□ 1.57
CDT1Q9H211 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDT1Q9H211 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDT1Q9H211 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.84■■□□□ 1.57
CDT1Q9H211 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDT1Q9H211 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.83■■□□□ 1.57
CDT1Q9H211 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.83■■□□□ 1.57
CDT1Q9H211 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDT1Q9H211 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDT1Q9H211 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDT1Q9H211 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDT1Q9H211 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDT1Q9H211 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CDT1Q9H211 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDT1Q9H211 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.83■■□□□ 1.56
CDT1Q9H211 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CDT1Q9H211 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CDT1Q9H211 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDT1Q9H211 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDT1Q9H211 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDT1Q9H211 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.82■■□□□ 1.56
CDT1Q9H211 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CDT1Q9H211 AC141586.4-201ENST00000624558 1573 ntBASIC24.82■■□□□ 1.56
CDT1Q9H211 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDT1Q9H211 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CDT1Q9H211 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CDT1Q9H211 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CDT1Q9H211 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.81■■□□□ 1.56
CDT1Q9H211 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.81■■□□□ 1.56
CDT1Q9H211 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.81■■□□□ 1.56
CDT1Q9H211 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDT1Q9H211 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.8■■□□□ 1.56
CDT1Q9H211 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CDT1Q9H211 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDT1Q9H211 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.8■■□□□ 1.56
CDT1Q9H211 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDT1Q9H211 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDT1Q9H211 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.8■■□□□ 1.56
CDT1Q9H211 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.8■■□□□ 1.56
CDT1Q9H211 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDT1Q9H211 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.79■■□□□ 1.56
CDT1Q9H211 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CDT1Q9H211 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDT1Q9H211 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDT1Q9H211 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.79■■□□□ 1.56
CDT1Q9H211 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDT1Q9H211 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
CDT1Q9H211 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDT1Q9H211 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.78■■□□□ 1.56
CDT1Q9H211 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDT1Q9H211 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDT1Q9H211 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.78■■□□□ 1.56
CDT1Q9H211 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDT1Q9H211 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.78■■□□□ 1.56
CDT1Q9H211 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDT1Q9H211 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDT1Q9H211 AC009102.2-201ENST00000606772 1639 ntBASIC24.77■■□□□ 1.56
CDT1Q9H211 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
CDT1Q9H211 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.77■■□□□ 1.56
CDT1Q9H211 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.77■■□□□ 1.56
CDT1Q9H211 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.77■■□□□ 1.56
CDT1Q9H211 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CDT1Q9H211 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.76■■□□□ 1.55
CDT1Q9H211 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.76■■□□□ 1.55
CDT1Q9H211 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDT1Q9H211 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDT1Q9H211 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDT1Q9H211 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CDT1Q9H211 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CDT1Q9H211 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.76■■□□□ 1.55
CDT1Q9H211 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDT1Q9H211 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.75■■□□□ 1.55
CDT1Q9H211 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDT1Q9H211 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDT1Q9H211 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDT1Q9H211 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDT1Q9H211 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
CDT1Q9H211 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.75■■□□□ 1.55
CDT1Q9H211 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.75■■□□□ 1.55
CDT1Q9H211 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.75■■□□□ 1.55
CDT1Q9H211 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDT1Q9H211 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
CDT1Q9H211 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CDT1Q9H211 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDT1Q9H211 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDT1Q9H211 AC004812.2-201ENST00000611079 2094 ntBASIC24.74■■□□□ 1.55
CDT1Q9H211 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDT1Q9H211 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDT1Q9H211 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CDT1Q9H211 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDT1Q9H211 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDT1Q9H211 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDT1Q9H211 SRD5A1P1-201ENST00000442297 786 ntBASIC24.73■■□□□ 1.55
CDT1Q9H211 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.73■■□□□ 1.55
CDT1Q9H211 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDT1Q9H211 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDT1Q9H211 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.72■■□□□ 1.55
CDT1Q9H211 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDT1Q9H211 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CDT1Q9H211 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms