Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.67■□□□□ 0.9
APH1BQ8WW43 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APH1BQ8WW43 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
APH1BQ8WW43 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.66■□□□□ 0.9
APH1BQ8WW43 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1BQ8WW43 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1BQ8WW43 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APH1BQ8WW43 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.66■□□□□ 0.9
APH1BQ8WW43 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APH1BQ8WW43 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.66■□□□□ 0.9
APH1BQ8WW43 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.66■□□□□ 0.9
APH1BQ8WW43 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1BQ8WW43 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.66■□□□□ 0.9
APH1BQ8WW43 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1BQ8WW43 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APH1BQ8WW43 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APH1BQ8WW43 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APH1BQ8WW43 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APH1BQ8WW43 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APH1BQ8WW43 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
APH1BQ8WW43 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
APH1BQ8WW43 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.65■□□□□ 0.9
APH1BQ8WW43 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APH1BQ8WW43 AC093536.1-201ENST00000569153 554 ntBASIC20.65■□□□□ 0.9
APH1BQ8WW43 MIR3648-2-201ENST00000581792 180 ntBASIC20.65■□□□□ 0.9
APH1BQ8WW43 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.65■□□□□ 0.9
APH1BQ8WW43 MIR3648-1-201ENST00000615959 180 ntBASIC20.65■□□□□ 0.9
APH1BQ8WW43 AL024507.2-201ENST00000606070 2574 ntBASIC20.65■□□□□ 0.9
APH1BQ8WW43 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
APH1BQ8WW43 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
APH1BQ8WW43 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APH1BQ8WW43 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.64■□□□□ 0.89
APH1BQ8WW43 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.64■□□□□ 0.89
APH1BQ8WW43 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.64■□□□□ 0.89
APH1BQ8WW43 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.64■□□□□ 0.89
APH1BQ8WW43 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
APH1BQ8WW43 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.63■□□□□ 0.89
APH1BQ8WW43 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APH1BQ8WW43 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APH1BQ8WW43 AL161729.1-201ENST00000604104 1402 ntBASIC20.63■□□□□ 0.89
APH1BQ8WW43 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APH1BQ8WW43 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.63■□□□□ 0.89
APH1BQ8WW43 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
APH1BQ8WW43 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APH1BQ8WW43 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.63■□□□□ 0.89
APH1BQ8WW43 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
APH1BQ8WW43 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
APH1BQ8WW43 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APH1BQ8WW43 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APH1BQ8WW43 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
APH1BQ8WW43 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APH1BQ8WW43 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
APH1BQ8WW43 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.62■□□□□ 0.89
APH1BQ8WW43 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APH1BQ8WW43 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APH1BQ8WW43 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APH1BQ8WW43 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APH1BQ8WW43 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.62■□□□□ 0.89
APH1BQ8WW43 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.62■□□□□ 0.89
APH1BQ8WW43 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APH1BQ8WW43 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.61■□□□□ 0.89
APH1BQ8WW43 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
APH1BQ8WW43 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.61■□□□□ 0.89
APH1BQ8WW43 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.61■□□□□ 0.89
APH1BQ8WW43 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
APH1BQ8WW43 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APH1BQ8WW43 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
APH1BQ8WW43 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APH1BQ8WW43 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
APH1BQ8WW43 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
APH1BQ8WW43 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APH1BQ8WW43 AC242852.2-201ENST00000615738 1807 ntBASIC20.6■□□□□ 0.89
APH1BQ8WW43 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
APH1BQ8WW43 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
APH1BQ8WW43 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APH1BQ8WW43 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APH1BQ8WW43 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.59■□□□□ 0.89
APH1BQ8WW43 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.59■□□□□ 0.89
APH1BQ8WW43 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.59■□□□□ 0.89
APH1BQ8WW43 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APH1BQ8WW43 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
APH1BQ8WW43 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
APH1BQ8WW43 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
APH1BQ8WW43 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
APH1BQ8WW43 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APH1BQ8WW43 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
APH1BQ8WW43 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APH1BQ8WW43 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
APH1BQ8WW43 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
APH1BQ8WW43 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
APH1BQ8WW43 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
APH1BQ8WW43 KRT18P10-201ENST00000388836 1287 ntBASIC20.58■□□□□ 0.89
APH1BQ8WW43 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.58■□□□□ 0.88
APH1BQ8WW43 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APH1BQ8WW43 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APH1BQ8WW43 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.58■□□□□ 0.88
APH1BQ8WW43 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.58■□□□□ 0.88
APH1BQ8WW43 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APH1BQ8WW43 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
APH1BQ8WW43 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms