Protein–RNA interactions for Protein: Q8N0Y7

PGAM4, Probable phosphoglycerate mutase 4, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM4Q8N0Y7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 AC093536.1-201ENST00000569153 554 ntBASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGAM4Q8N0Y7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PGAM4Q8N0Y7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 MIR3648-2-201ENST00000581792 180 ntBASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 MIR3648-1-201ENST00000615959 180 ntBASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.74■■□□□ 1.07
PGAM4Q8N0Y7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGAM4Q8N0Y7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGAM4Q8N0Y7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.73■■□□□ 1.07
PGAM4Q8N0Y7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PGAM4Q8N0Y7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGAM4Q8N0Y7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
PGAM4Q8N0Y7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PGAM4Q8N0Y7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 AC242852.2-201ENST00000615738 1807 ntBASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 RPS2P35-201ENST00000443417 897 ntBASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 AC007375.3-201ENST00000600936 2314 ntBASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGAM4Q8N0Y7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.71■■□□□ 1.07
PGAM4Q8N0Y7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.71■■□□□ 1.07
PGAM4Q8N0Y7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.71■■□□□ 1.07
PGAM4Q8N0Y7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.71■■□□□ 1.07
PGAM4Q8N0Y7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PGAM4Q8N0Y7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGAM4Q8N0Y7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PGAM4Q8N0Y7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 ECEL1P2-201ENST00000461596 1295 ntBASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGAM4Q8N0Y7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PGAM4Q8N0Y7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 ESRRAP2-201ENST00000418437 1549 ntBASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PGAM4Q8N0Y7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms