Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.83■■□□□ 1.09
CDCP2Q5VXM1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDCP2Q5VXM1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDCP2Q5VXM1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.83■■□□□ 1.08
CDCP2Q5VXM1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CDCP2Q5VXM1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.83■■□□□ 1.08
CDCP2Q5VXM1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCP2Q5VXM1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CDCP2Q5VXM1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CDCP2Q5VXM1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCP2Q5VXM1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.82■■□□□ 1.08
CDCP2Q5VXM1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.82■■□□□ 1.08
CDCP2Q5VXM1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.82■■□□□ 1.08
CDCP2Q5VXM1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.82■■□□□ 1.08
CDCP2Q5VXM1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCP2Q5VXM1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCP2Q5VXM1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCP2Q5VXM1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCP2Q5VXM1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.81■■□□□ 1.08
CDCP2Q5VXM1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCP2Q5VXM1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCP2Q5VXM1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCP2Q5VXM1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.81■■□□□ 1.08
CDCP2Q5VXM1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCP2Q5VXM1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 RARRES2P11-201ENST00000635158 484 ntBASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.79■■□□□ 1.08
CDCP2Q5VXM1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDCP2Q5VXM1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.77■■□□□ 1.08
CDCP2Q5VXM1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.77■■□□□ 1.08
CDCP2Q5VXM1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDCP2Q5VXM1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.77■■□□□ 1.08
CDCP2Q5VXM1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCP2Q5VXM1 YBX1P1-201ENST00000445822 960 ntBASIC21.77■■□□□ 1.08
CDCP2Q5VXM1 AC022517.1-201ENST00000592429 346 ntBASIC21.77■■□□□ 1.08
CDCP2Q5VXM1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.77■■□□□ 1.08
CDCP2Q5VXM1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDCP2Q5VXM1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
CDCP2Q5VXM1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDCP2Q5VXM1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCP2Q5VXM1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.76■■□□□ 1.07
CDCP2Q5VXM1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.76■■□□□ 1.07
CDCP2Q5VXM1 AC090192.1-201ENST00000517740 490 ntBASIC21.76■■□□□ 1.07
CDCP2Q5VXM1 IKBKGP1-201ENST00000612193 1073 ntBASIC21.76■■□□□ 1.07
CDCP2Q5VXM1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 AL161729.1-201ENST00000604104 1402 ntBASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 KRT18P5-201ENST00000436075 1291 ntBASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 AC126544.1-201ENST00000580842 1059 ntBASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 pRNA.6-201ENST00000610482 90 ntBASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 pRNA.5-201ENST00000612139 90 ntBASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 pRNA.11-201ENST00000618423 90 ntBASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 pRNA.13-201ENST00000619112 90 ntBASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 AL031602.1-201ENST00000633169 911 ntBASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCP2Q5VXM1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCP2Q5VXM1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCP2Q5VXM1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCP2Q5VXM1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCP2Q5VXM1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.74■■□□□ 1.07
CDCP2Q5VXM1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms