Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
APOC4P55056 DUX4L19-201ENST00000557448 1267 ntBASIC16.71■□□□□ 0.27
APOC4P55056 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
APOC4P55056 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.71■□□□□ 0.27
APOC4P55056 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOC4P55056 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOC4P55056 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOC4P55056 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.7■□□□□ 0.26
APOC4P55056 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOC4P55056 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
APOC4P55056 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
APOC4P55056 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
APOC4P55056 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.7■□□□□ 0.26
APOC4P55056 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.7■□□□□ 0.26
APOC4P55056 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.7■□□□□ 0.26
APOC4P55056 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOC4P55056 AC096631.2-201ENST00000436136 790 ntBASIC16.7■□□□□ 0.26
APOC4P55056 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.7■□□□□ 0.26
APOC4P55056 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.7■□□□□ 0.26
APOC4P55056 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOC4P55056 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.7■□□□□ 0.26
APOC4P55056 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APOC4P55056 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
APOC4P55056 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOC4P55056 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOC4P55056 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOC4P55056 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOC4P55056 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOC4P55056 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
APOC4P55056 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOC4P55056 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.69■□□□□ 0.26
APOC4P55056 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.69■□□□□ 0.26
APOC4P55056 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOC4P55056 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APOC4P55056 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
APOC4P55056 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOC4P55056 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.68■□□□□ 0.26
APOC4P55056 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
APOC4P55056 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.68■□□□□ 0.26
APOC4P55056 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOC4P55056 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.68■□□□□ 0.26
APOC4P55056 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.68■□□□□ 0.26
APOC4P55056 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APOC4P55056 ALDH1A3-203ENST00000557963 1670 ntBASIC16.68■□□□□ 0.26
APOC4P55056 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APOC4P55056 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOC4P55056 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOC4P55056 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOC4P55056 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.68■□□□□ 0.26
APOC4P55056 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOC4P55056 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOC4P55056 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOC4P55056 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
APOC4P55056 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.67■□□□□ 0.26
APOC4P55056 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APOC4P55056 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.67■□□□□ 0.26
APOC4P55056 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.67■□□□□ 0.26
APOC4P55056 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOC4P55056 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOC4P55056 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.66■□□□□ 0.26
APOC4P55056 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APOC4P55056 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOC4P55056 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOC4P55056 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.65■□□□□ 0.26
APOC4P55056 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC4P55056 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOC4P55056 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
APOC4P55056 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC4P55056 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOC4P55056 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC4P55056 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APOC4P55056 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC4P55056 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC4P55056 AC241377.3-202ENST00000626088 1088 ntBASIC16.64■□□□□ 0.25
APOC4P55056 AC241585.3-202ENST00000628937 1088 ntBASIC16.64■□□□□ 0.25
APOC4P55056 AC245100.8-202ENST00000629247 1058 ntBASIC16.64■□□□□ 0.25
APOC4P55056 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APOC4P55056 SHF-207ENST00000560540 2062 ntTSL 5 BASIC16.64■□□□□ 0.25
APOC4P55056 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC4P55056 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.64■□□□□ 0.25
APOC4P55056 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC4P55056 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOC4P55056 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC4P55056 AC138932.3-201ENST00000567634 1902 ntBASIC16.63■□□□□ 0.25
APOC4P55056 MIR638-201ENST00000385237 100 ntBASIC16.63■□□□□ 0.25
APOC4P55056 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOC4P55056 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOC4P55056 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOC4P55056 AC133561.4-201ENST00000566112 224 ntBASIC16.63■□□□□ 0.25
APOC4P55056 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.63■□□□□ 0.25
APOC4P55056 AC110285.6-201ENST00000617652 491 ntBASIC16.63■□□□□ 0.25
APOC4P55056 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.63■□□□□ 0.25
APOC4P55056 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOC4P55056 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC4P55056 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC4P55056 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC4P55056 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.63■□□□□ 0.25
APOC4P55056 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.63■□□□□ 0.25
APOC4P55056 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.62■□□□□ 0.25
APOC4P55056 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms