Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
PTPN6P29350 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN6P29350 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.66■■□□□ 1.06
PTPN6P29350 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN6P29350 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN6P29350 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN6P29350 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PTPN6P29350 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN6P29350 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN6P29350 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN6P29350 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPN6P29350 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN6P29350 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN6P29350 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.64■■□□□ 1.06
PTPN6P29350 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PTPN6P29350 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTPN6P29350 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
PTPN6P29350 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN6P29350 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.64■■□□□ 1.05
PTPN6P29350 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPN6P29350 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN6P29350 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PTPN6P29350 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.63■■□□□ 1.05
PTPN6P29350 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN6P29350 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN6P29350 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.63■■□□□ 1.05
PTPN6P29350 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PTPN6P29350 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN6P29350 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN6P29350 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.63■■□□□ 1.05
PTPN6P29350 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN6P29350 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN6P29350 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN6P29350 AC092068.2-201ENST00000590491 1708 ntBASIC21.63■■□□□ 1.05
PTPN6P29350 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN6P29350 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN6P29350 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PTPN6P29350 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PTPN6P29350 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN6P29350 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN6P29350 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PTPN6P29350 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN6P29350 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.62■■□□□ 1.05
PTPN6P29350 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PTPN6P29350 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.62■■□□□ 1.05
PTPN6P29350 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PTPN6P29350 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN6P29350 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.62■■□□□ 1.05
PTPN6P29350 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN6P29350 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PTPN6P29350 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN6P29350 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN6P29350 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN6P29350 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN6P29350 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PTPN6P29350 AC079834.2-201ENST00000609776 1949 ntBASIC21.61■■□□□ 1.05
PTPN6P29350 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.6■■□□□ 1.05
PTPN6P29350 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN6P29350 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN6P29350 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN6P29350 DUSP8P3-201ENST00000399571 1760 ntBASIC21.6■■□□□ 1.05
PTPN6P29350 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN6P29350 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.6■■□□□ 1.05
PTPN6P29350 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN6P29350 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN6P29350 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PTPN6P29350 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN6P29350 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN6P29350 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN6P29350 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN6P29350 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.59■■□□□ 1.05
PTPN6P29350 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PTPN6P29350 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.59■■□□□ 1.05
PTPN6P29350 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.59■■□□□ 1.05
PTPN6P29350 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN6P29350 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN6P29350 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN6P29350 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
PTPN6P29350 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN6P29350 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN6P29350 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN6P29350 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN6P29350 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN6P29350 AC022616.5-201ENST00000518796 181 ntBASIC21.58■■□□□ 1.05
PTPN6P29350 AC103724.3-201ENST00000564481 992 ntBASIC21.58■■□□□ 1.05
PTPN6P29350 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PTPN6P29350 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.57■■□□□ 1.04
PTPN6P29350 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN6P29350 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.57■■□□□ 1.04
PTPN6P29350 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.57■■□□□ 1.04
PTPN6P29350 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN6P29350 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN6P29350 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN6P29350 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PTPN6P29350 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN6P29350 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN6P29350 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN6P29350 AL451085.2-201ENST00000605085 799 ntBASIC21.56■■□□□ 1.04
PTPN6P29350 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPN6P29350 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms