Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.9■□□□□ 0.78
UBCP0CG48 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.9■□□□□ 0.78
UBCP0CG48 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.9■□□□□ 0.78
UBCP0CG48 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 C9orf163-202ENST00000624034 2573 ntBASIC19.9■□□□□ 0.78
UBCP0CG48 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
UBCP0CG48 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.9■□□□□ 0.78
UBCP0CG48 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
UBCP0CG48 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
UBCP0CG48 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBCP0CG48 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBCP0CG48 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBCP0CG48 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBCP0CG48 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBCP0CG48 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBCP0CG48 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBCP0CG48 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.89■□□□□ 0.77
UBCP0CG48 AC129492.7-201ENST00000622992 756 ntBASIC19.89■□□□□ 0.77
UBCP0CG48 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.89■□□□□ 0.77
UBCP0CG48 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBCP0CG48 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBCP0CG48 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBCP0CG48 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBCP0CG48 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBCP0CG48 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.88■□□□□ 0.77
UBCP0CG48 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
UBCP0CG48 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBCP0CG48 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBCP0CG48 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBCP0CG48 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBCP0CG48 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBCP0CG48 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.87■□□□□ 0.77
UBCP0CG48 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.87■□□□□ 0.77
UBCP0CG48 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBCP0CG48 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UBCP0CG48 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UBCP0CG48 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBCP0CG48 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.87■□□□□ 0.77
UBCP0CG48 U85056.1-201ENST00000616429 682 ntBASIC19.87■□□□□ 0.77
UBCP0CG48 DUSP8P3-201ENST00000399571 1760 ntBASIC19.87■□□□□ 0.77
UBCP0CG48 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBCP0CG48 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBCP0CG48 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
UBCP0CG48 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.87■□□□□ 0.77
UBCP0CG48 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.87■□□□□ 0.77
UBCP0CG48 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBCP0CG48 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
UBCP0CG48 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBCP0CG48 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBCP0CG48 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.86■□□□□ 0.77
UBCP0CG48 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBCP0CG48 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBCP0CG48 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.86■□□□□ 0.77
UBCP0CG48 AC022616.5-201ENST00000518796 181 ntBASIC19.86■□□□□ 0.77
UBCP0CG48 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBCP0CG48 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
UBCP0CG48 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBCP0CG48 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
UBCP0CG48 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.85■□□□□ 0.77
UBCP0CG48 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
UBCP0CG48 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBCP0CG48 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBCP0CG48 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBCP0CG48 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBCP0CG48 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBCP0CG48 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBCP0CG48 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.85■□□□□ 0.77
UBCP0CG48 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBCP0CG48 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBCP0CG48 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBCP0CG48 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBCP0CG48 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBCP0CG48 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBCP0CG48 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBCP0CG48 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBCP0CG48 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBCP0CG48 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBCP0CG48 HSD17B1P1-201ENST00000590052 955 ntBASIC19.84■□□□□ 0.77
UBCP0CG48 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBCP0CG48 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBCP0CG48 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBCP0CG48 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBCP0CG48 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBCP0CG48 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBCP0CG48 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBCP0CG48 AC019171.1-201ENST00000601251 1056 ntBASIC19.83■□□□□ 0.77
UBCP0CG48 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.76
UBCP0CG48 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBCP0CG48 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.83■□□□□ 0.76
UBCP0CG48 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.83■□□□□ 0.76
UBCP0CG48 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms