Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF253O75346 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF253O75346 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
ZNF253O75346 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF253O75346 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ZNF253O75346 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF253O75346 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF253O75346 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF253O75346 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ZNF253O75346 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF253O75346 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF253O75346 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF253O75346 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF253O75346 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF253O75346 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF253O75346 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF253O75346 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF253O75346 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF253O75346 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.58■□□□□ 0.4
ZNF253O75346 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF253O75346 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF253O75346 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF253O75346 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF253O75346 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF253O75346 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF253O75346 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF253O75346 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF253O75346 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF253O75346 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF253O75346 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNF253O75346 AL161729.1-201ENST00000604104 1402 ntBASIC17.57■□□□□ 0.4
ZNF253O75346 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.57■□□□□ 0.4
ZNF253O75346 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF253O75346 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF253O75346 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF253O75346 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF253O75346 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF253O75346 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF253O75346 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF253O75346 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF253O75346 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF253O75346 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF253O75346 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF253O75346 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF253O75346 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ZNF253O75346 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF253O75346 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF253O75346 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZNF253O75346 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ZNF253O75346 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF253O75346 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF253O75346 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ZNF253O75346 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF253O75346 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF253O75346 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF253O75346 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
ZNF253O75346 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF253O75346 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF253O75346 EP400NL-214ENST00000641289 2402 ntBASIC17.55■□□□□ 0.4
ZNF253O75346 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ZNF253O75346 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF253O75346 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF253O75346 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF253O75346 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF253O75346 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF253O75346 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF253O75346 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF253O75346 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF253O75346 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF253O75346 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF253O75346 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF253O75346 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF253O75346 GPX1-201ENST00000419349 1106 ntBASIC17.54■□□□□ 0.4
ZNF253O75346 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZNF253O75346 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.54■□□□□ 0.4
ZNF253O75346 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF253O75346 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ZNF253O75346 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF253O75346 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZNF253O75346 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF253O75346 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF253O75346 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms