Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PFDN1O60925 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.5■□□□□ 0.87
PFDN1O60925 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PFDN1O60925 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PFDN1O60925 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PFDN1O60925 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PFDN1O60925 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PFDN1O60925 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PFDN1O60925 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PFDN1O60925 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PFDN1O60925 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PFDN1O60925 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.49■□□□□ 0.87
PFDN1O60925 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.49■□□□□ 0.87
PFDN1O60925 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PFDN1O60925 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
PFDN1O60925 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PFDN1O60925 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PFDN1O60925 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.48■□□□□ 0.87
PFDN1O60925 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PFDN1O60925 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PFDN1O60925 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PFDN1O60925 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
PFDN1O60925 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PFDN1O60925 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PFDN1O60925 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PFDN1O60925 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PFDN1O60925 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PFDN1O60925 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PFDN1O60925 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PFDN1O60925 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PFDN1O60925 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.46■□□□□ 0.87
PFDN1O60925 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.46■□□□□ 0.87
PFDN1O60925 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PFDN1O60925 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PFDN1O60925 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.46■□□□□ 0.87
PFDN1O60925 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PFDN1O60925 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PFDN1O60925 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PFDN1O60925 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.46■□□□□ 0.87
PFDN1O60925 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PFDN1O60925 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PFDN1O60925 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
PFDN1O60925 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PFDN1O60925 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PFDN1O60925 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PFDN1O60925 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PFDN1O60925 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PFDN1O60925 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PFDN1O60925 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PFDN1O60925 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PFDN1O60925 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PFDN1O60925 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
PFDN1O60925 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PFDN1O60925 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PFDN1O60925 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PFDN1O60925 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
PFDN1O60925 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PFDN1O60925 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PFDN1O60925 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PFDN1O60925 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.44■□□□□ 0.86
PFDN1O60925 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PFDN1O60925 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PFDN1O60925 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PFDN1O60925 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.43■□□□□ 0.86
PFDN1O60925 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PFDN1O60925 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PFDN1O60925 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PFDN1O60925 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.42■□□□□ 0.86
PFDN1O60925 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PFDN1O60925 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PFDN1O60925 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PFDN1O60925 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PFDN1O60925 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PFDN1O60925 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.42■□□□□ 0.86
PFDN1O60925 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PFDN1O60925 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PFDN1O60925 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.41■□□□□ 0.86
PFDN1O60925 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PFDN1O60925 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.41■□□□□ 0.86
PFDN1O60925 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PFDN1O60925 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PFDN1O60925 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PFDN1O60925 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PFDN1O60925 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PFDN1O60925 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PFDN1O60925 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PFDN1O60925 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PFDN1O60925 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PFDN1O60925 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.4■□□□□ 0.86
PFDN1O60925 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms