Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GMDSO60547 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GMDSO60547 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.03■□□□□ 0.8
GMDSO60547 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.03■□□□□ 0.8
GMDSO60547 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.03■□□□□ 0.8
GMDSO60547 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GMDSO60547 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GMDSO60547 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
GMDSO60547 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.02■□□□□ 0.8
GMDSO60547 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
GMDSO60547 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.02■□□□□ 0.8
GMDSO60547 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GMDSO60547 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.02■□□□□ 0.8
GMDSO60547 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.02■□□□□ 0.8
GMDSO60547 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
GMDSO60547 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
GMDSO60547 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
GMDSO60547 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
GMDSO60547 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GMDSO60547 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.02■□□□□ 0.79
GMDSO60547 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GMDSO60547 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.01■□□□□ 0.79
GMDSO60547 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.01■□□□□ 0.79
GMDSO60547 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GMDSO60547 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20■□□□□ 0.79
GMDSO60547 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20■□□□□ 0.79
GMDSO60547 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20■□□□□ 0.79
GMDSO60547 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20■□□□□ 0.79
GMDSO60547 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20■□□□□ 0.79
GMDSO60547 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GMDSO60547 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
GMDSO60547 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GMDSO60547 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
GMDSO60547 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GMDSO60547 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.99■□□□□ 0.79
GMDSO60547 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GMDSO60547 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
GMDSO60547 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GMDSO60547 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.99■□□□□ 0.79
GMDSO60547 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.99■□□□□ 0.79
GMDSO60547 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GMDSO60547 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GMDSO60547 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GMDSO60547 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GMDSO60547 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GMDSO60547 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.99■□□□□ 0.79
GMDSO60547 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GMDSO60547 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.98■□□□□ 0.79
GMDSO60547 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
GMDSO60547 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GMDSO60547 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.98■□□□□ 0.79
GMDSO60547 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GMDSO60547 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
GMDSO60547 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GMDSO60547 EP400NL-214ENST00000641289 2402 ntBASIC19.97■□□□□ 0.79
GMDSO60547 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.97■□□□□ 0.79
GMDSO60547 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GMDSO60547 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.97■□□□□ 0.79
GMDSO60547 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.97■□□□□ 0.79
GMDSO60547 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.97■□□□□ 0.79
GMDSO60547 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GMDSO60547 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GMDSO60547 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GMDSO60547 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.96■□□□□ 0.79
GMDSO60547 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GMDSO60547 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GMDSO60547 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
GMDSO60547 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GMDSO60547 LINC00565-201ENST00000562710 2331 ntBASIC19.96■□□□□ 0.79
GMDSO60547 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GMDSO60547 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GMDSO60547 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
GMDSO60547 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.96■□□□□ 0.79
GMDSO60547 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.96■□□□□ 0.79
GMDSO60547 AC010980.1-201ENST00000587192 1142 ntBASIC19.96■□□□□ 0.79
GMDSO60547 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
GMDSO60547 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
GMDSO60547 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.96■□□□□ 0.79
GMDSO60547 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GMDSO60547 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
GMDSO60547 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
GMDSO60547 AC090877.2-201ENST00000558441 1738 ntBASIC19.96■□□□□ 0.79
GMDSO60547 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GMDSO60547 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GMDSO60547 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GMDSO60547 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GMDSO60547 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GMDSO60547 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
GMDSO60547 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GMDSO60547 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GMDSO60547 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GMDSO60547 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GMDSO60547 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.94■□□□□ 0.78
GMDSO60547 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.94■□□□□ 0.78
GMDSO60547 AC011551.1-201ENST00000614101 683 ntBASIC19.94■□□□□ 0.78
GMDSO60547 PVT1_1.1-201ENST00000615125 194 ntBASIC19.94■□□□□ 0.78
GMDSO60547 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GMDSO60547 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GMDSO60547 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GMDSO60547 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms