Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
SGCDQ92629 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.54□□□□□ -0.24
SGCDQ92629 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SGCDQ92629 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 VENTXP1-201ENST00000569334 2716 ntBASIC13.54□□□□□ -0.24
SGCDQ92629 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SGCDQ92629 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SGCDQ92629 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.54□□□□□ -0.24
SGCDQ92629 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.54□□□□□ -0.24
SGCDQ92629 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.54□□□□□ -0.24
SGCDQ92629 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
SGCDQ92629 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.54□□□□□ -0.24
SGCDQ92629 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.54□□□□□ -0.24
SGCDQ92629 AC092902.6-201ENST00000641783 218 ntBASIC13.54□□□□□ -0.24
SGCDQ92629 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.54□□□□□ -0.24
SGCDQ92629 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.54□□□□□ -0.24
SGCDQ92629 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
SGCDQ92629 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.54□□□□□ -0.24
SGCDQ92629 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.54□□□□□ -0.24
SGCDQ92629 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.54□□□□□ -0.24
SGCDQ92629 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.54□□□□□ -0.24
SGCDQ92629 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SGCDQ92629 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.54□□□□□ -0.24
SGCDQ92629 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SGCDQ92629 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.53□□□□□ -0.24
SGCDQ92629 CICP1-201ENST00000416803 2410 ntBASIC13.53□□□□□ -0.24
SGCDQ92629 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 AL031719.1-201ENST00000623365 2587 ntBASIC13.53□□□□□ -0.24
SGCDQ92629 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.53□□□□□ -0.24
SGCDQ92629 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SGCDQ92629 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.53□□□□□ -0.24
SGCDQ92629 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SGCDQ92629 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.53□□□□□ -0.24
SGCDQ92629 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.53□□□□□ -0.24
SGCDQ92629 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.53□□□□□ -0.24
SGCDQ92629 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.53□□□□□ -0.24
SGCDQ92629 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.53□□□□□ -0.24
SGCDQ92629 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.53□□□□□ -0.24
SGCDQ92629 LINC01115-203ENST00000606068 577 ntBASIC13.53□□□□□ -0.24
SGCDQ92629 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.53□□□□□ -0.24
SGCDQ92629 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.53□□□□□ -0.24
SGCDQ92629 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms