Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 AC015922.1-201ENST00000421102 1152 ntBASIC11.05□□□□□ -0.64
NUP35Q8NFH5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 IGHV3-62-201ENST00000520057 340 ntBASIC11.05□□□□□ -0.64
NUP35Q8NFH5 FAM86C2P-203ENST00000528684 1004 ntBASIC11.05□□□□□ -0.64
NUP35Q8NFH5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 BANF1P1-201ENST00000553684 263 ntBASIC11.05□□□□□ -0.64
NUP35Q8NFH5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.05□□□□□ -0.64
NUP35Q8NFH5 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 Z97205.2-201ENST00000564697 1639 ntBASIC11.05□□□□□ -0.64
NUP35Q8NFH5 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 MKRN5P-201ENST00000445263 1467 ntBASIC11.05□□□□□ -0.64
NUP35Q8NFH5 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
NUP35Q8NFH5 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 DLX4-206ENST00000611342 1662 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 POM121L14P-201ENST00000406100 1558 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 SPCS2P4-201ENST00000436160 681 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AC079776.4-201ENST00000511039 504 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 KRT8P23-201ENST00000560090 1207 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AC243562.1-201ENST00000560672 389 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AC034105.1-201ENST00000563488 319 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 LINC01225-203ENST00000563550 1244 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AC092364.2-202ENST00000597012 1073 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AL049840.3-201ENST00000602669 611 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AC116407.3-201ENST00000623905 1129 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AGAP12P-201ENST00000585227 2359 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms