Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 DLX4-206ENST00000611342 1662 ntBASIC13.91□□□□□ -0.18
LPCAT4Q643R3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 AC004870.1-201ENST00000315132 882 ntBASIC13.91□□□□□ -0.18
LPCAT4Q643R3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 AL355306.1-201ENST00000415580 579 ntBASIC13.91□□□□□ -0.18
LPCAT4Q643R3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 IGHV3-22-201ENST00000520721 359 ntBASIC13.91□□□□□ -0.18
LPCAT4Q643R3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 AC105021.1-202ENST00000570572 669 ntBASIC13.91□□□□□ -0.18
LPCAT4Q643R3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 MIR6074-201ENST00000612054 107 ntBASIC13.91□□□□□ -0.18
LPCAT4Q643R3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.91□□□□□ -0.18
LPCAT4Q643R3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 AC015819.3-201ENST00000624305 2674 ntBASIC13.9□□□□□ -0.18
LPCAT4Q643R3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.9□□□□□ -0.18
LPCAT4Q643R3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 AC136604.1-202ENST00000425471 771 ntBASIC13.9□□□□□ -0.18
LPCAT4Q643R3 SPCS2P4-201ENST00000436160 681 ntBASIC13.9□□□□□ -0.18
LPCAT4Q643R3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 KRT18P43-201ENST00000469825 1281 ntBASIC13.9□□□□□ -0.18
LPCAT4Q643R3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 RARRES2P9-201ENST00000565168 469 ntBASIC13.9□□□□□ -0.18
LPCAT4Q643R3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms