Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.01□□□□□ -0.17
CASP9P55211 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 AC002472.2-201ENST00000442739 958 ntBASIC14.01□□□□□ -0.17
CASP9P55211 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CASP9P55211 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.01□□□□□ -0.17
CASP9P55211 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.01□□□□□ -0.17
CASP9P55211 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.01□□□□□ -0.17
CASP9P55211 TMEM261P1-201ENST00000604899 340 ntBASIC14.01□□□□□ -0.17
CASP9P55211 WFDC1-204ENST00000613603 549 ntBASIC14.01□□□□□ -0.17
CASP9P55211 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.01□□□□□ -0.17
CASP9P55211 CU634019.7-201ENST00000624153 1185 ntBASIC14.01□□□□□ -0.17
CASP9P55211 FP236241.2-201ENST00000624906 1185 ntBASIC14.01□□□□□ -0.17
CASP9P55211 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
CASP9P55211 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CASP9P55211 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.01□□□□□ -0.17
CASP9P55211 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CASP9P55211 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.01□□□□□ -0.17
CASP9P55211 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14□□□□□ -0.17
CASP9P55211 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14□□□□□ -0.17
CASP9P55211 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CASP9P55211 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CASP9P55211 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14□□□□□ -0.17
CASP9P55211 AL136172.1-201ENST00000598590 1394 ntBASIC14□□□□□ -0.17
CASP9P55211 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14□□□□□ -0.17
CASP9P55211 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14□□□□□ -0.17
CASP9P55211 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14□□□□□ -0.17
CASP9P55211 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
CASP9P55211 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14□□□□□ -0.17
CASP9P55211 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14□□□□□ -0.17
CASP9P55211 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CASP9P55211 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14□□□□□ -0.17
CASP9P55211 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CASP9P55211 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14□□□□□ -0.17
CASP9P55211 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14□□□□□ -0.17
CASP9P55211 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14□□□□□ -0.17
CASP9P55211 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14□□□□□ -0.17
CASP9P55211 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14□□□□□ -0.17
CASP9P55211 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14□□□□□ -0.17
CASP9P55211 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CASP9P55211 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14□□□□□ -0.17
CASP9P55211 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14□□□□□ -0.17
CASP9P55211 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CASP9P55211 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CASP9P55211 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CASP9P55211 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CASP9P55211 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.99□□□□□ -0.17
CASP9P55211 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CASP9P55211 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CASP9P55211 AC020910.5-201ENST00000623668 1865 ntBASIC13.99□□□□□ -0.17
CASP9P55211 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CASP9P55211 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CASP9P55211 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.99□□□□□ -0.17
CASP9P55211 AC092135.3-201ENST00000624151 1846 ntBASIC13.99□□□□□ -0.17
CASP9P55211 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CASP9P55211 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CASP9P55211 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CASP9P55211 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms