Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 FAM21EP-201ENST00000417804 985 ntBASIC18.79■□□□□ 0.6
COL5A2P05997 AC004522.1-201ENST00000419978 654 ntBASIC18.79■□□□□ 0.6
COL5A2P05997 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC18.79■□□□□ 0.6
COL5A2P05997 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC18.79■□□□□ 0.6
COL5A2P05997 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC18.79■□□□□ 0.6
COL5A2P05997 RPS18P9-201ENST00000482817 460 ntBASIC18.79■□□□□ 0.6
COL5A2P05997 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC18.79■□□□□ 0.6
COL5A2P05997 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC18.79■□□□□ 0.6
COL5A2P05997 TYMSP2-201ENST00000589501 424 ntBASIC18.79■□□□□ 0.6
COL5A2P05997 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COL5A2P05997 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.79■□□□□ 0.6
COL5A2P05997 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.79■□□□□ 0.6
COL5A2P05997 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
COL5A2P05997 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL5A2P05997 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COL5A2P05997 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 AL109954.1-202ENST00000564051 2148 ntBASIC18.79■□□□□ 0.6
COL5A2P05997 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COL5A2P05997 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COL5A2P05997 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL5A2P05997 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC18.78■□□□□ 0.6
COL5A2P05997 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC18.78■□□□□ 0.6
COL5A2P05997 EEF1DP2-201ENST00000433698 843 ntBASIC18.78■□□□□ 0.6
COL5A2P05997 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC18.78■□□□□ 0.6
COL5A2P05997 FTLP5-201ENST00000586853 534 ntBASIC18.78■□□□□ 0.6
COL5A2P05997 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
COL5A2P05997 AL031673.1-201ENST00000611460 466 ntBASIC18.78■□□□□ 0.6
COL5A2P05997 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.78■□□□□ 0.6
COL5A2P05997 AL354702.1-201ENST00000442006 1960 ntBASIC18.78■□□□□ 0.6
COL5A2P05997 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.78■□□□□ 0.6
COL5A2P05997 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 AC215219.1-201ENST00000400706 1817 ntBASIC18.78■□□□□ 0.6
COL5A2P05997 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
COL5A2P05997 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
COL5A2P05997 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
COL5A2P05997 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL5A2P05997 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.77■□□□□ 0.6
COL5A2P05997 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL5A2P05997 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC18.77■□□□□ 0.6
COL5A2P05997 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC18.77■□□□□ 0.6
COL5A2P05997 AL080243.1-201ENST00000423293 1060 ntBASIC18.77■□□□□ 0.6
COL5A2P05997 SERBP1P2-201ENST00000436888 1164 ntBASIC18.77■□□□□ 0.6
COL5A2P05997 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC18.77■□□□□ 0.6
COL5A2P05997 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC18.77■□□□□ 0.6
COL5A2P05997 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC18.77■□□□□ 0.6
COL5A2P05997 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC18.77■□□□□ 0.6
COL5A2P05997 AC126755.5-201ENST00000622756 267 ntBASIC18.77■□□□□ 0.6
COL5A2P05997 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC18.77■□□□□ 0.6
COL5A2P05997 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL5A2P05997 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
COL5A2P05997 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.77■□□□□ 0.6
COL5A2P05997 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL5A2P05997 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.77■□□□□ 0.6
COL5A2P05997 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL5A2P05997 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL5A2P05997 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COL5A2P05997 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COL5A2P05997 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms