Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.44■□□□□ 0.06
ERBB2P04626 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.44■□□□□ 0.06
ERBB2P04626 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.44■□□□□ 0.06
ERBB2P04626 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ERBB2P04626 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.44■□□□□ 0.06
ERBB2P04626 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.44■□□□□ 0.06
ERBB2P04626 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ERBB2P04626 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ERBB2P04626 FAM21FP-201ENST00000426241 1131 ntBASIC15.44■□□□□ 0.06
ERBB2P04626 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.44■□□□□ 0.06
ERBB2P04626 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.44■□□□□ 0.06
ERBB2P04626 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.44■□□□□ 0.06
ERBB2P04626 AC244157.2-201ENST00000616239 1006 ntBASIC15.44■□□□□ 0.06
ERBB2P04626 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.44■□□□□ 0.06
ERBB2P04626 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.44■□□□□ 0.06
ERBB2P04626 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.44■□□□□ 0.06
ERBB2P04626 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.44■□□□□ 0.06
ERBB2P04626 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 AC244394.1-201ENST00000435000 1665 ntBASIC15.44■□□□□ 0.06
ERBB2P04626 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.44■□□□□ 0.06
ERBB2P04626 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.44■□□□□ 0.06
ERBB2P04626 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.44■□□□□ 0.06
ERBB2P04626 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERBB2P04626 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.43■□□□□ 0.06
ERBB2P04626 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
ERBB2P04626 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 AL645933.1-201ENST00000440087 609 ntBASIC15.43■□□□□ 0.06
ERBB2P04626 KLF2P1-201ENST00000447438 1042 ntBASIC15.43■□□□□ 0.06
ERBB2P04626 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.43■□□□□ 0.06
ERBB2P04626 RNA5SP412-201ENST00000516234 123 ntBASIC15.43■□□□□ 0.06
ERBB2P04626 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.43■□□□□ 0.06
ERBB2P04626 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.43■□□□□ 0.06
ERBB2P04626 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.43■□□□□ 0.06
ERBB2P04626 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.43■□□□□ 0.06
ERBB2P04626 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.43■□□□□ 0.06
ERBB2P04626 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
ERBB2P04626 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ERBB2P04626 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
ERBB2P04626 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ERBB2P04626 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ERBB2P04626 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 TMBIM7P-202ENST00000641474 1516 ntBASIC15.43■□□□□ 0.06
ERBB2P04626 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERBB2P04626 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERBB2P04626 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.42■□□□□ 0.06
ERBB2P04626 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ERBB2P04626 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERBB2P04626 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ERBB2P04626 OR2I1P-209ENST00000641730 5365 ntBASIC15.42■□□□□ 0.06
ERBB2P04626 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERBB2P04626 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERBB2P04626 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
ERBB2P04626 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ERBB2P04626 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERBB2P04626 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERBB2P04626 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERBB2P04626 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms