Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
SNAI2O43623 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SNAI2O43623 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 KRT8P22-201ENST00000562317 1415 ntBASIC11.11□□□□□ -0.63
SNAI2O43623 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
SNAI2O43623 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 AC023090.2-201ENST00000625182 2110 ntBASIC11.11□□□□□ -0.63
SNAI2O43623 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SNAI2O43623 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.11□□□□□ -0.63
SNAI2O43623 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SNAI2O43623 AL590627.1-203ENST00000421194 1026 ntBASIC11.11□□□□□ -0.63
SNAI2O43623 AC005237.2-201ENST00000434368 219 ntBASIC11.11□□□□□ -0.63
SNAI2O43623 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.11□□□□□ -0.63
SNAI2O43623 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.11□□□□□ -0.63
SNAI2O43623 AC022145.2-201ENST00000598203 171 ntBASIC11.11□□□□□ -0.63
SNAI2O43623 AC074044.1-201ENST00000609673 707 ntBASIC11.11□□□□□ -0.63
SNAI2O43623 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 BX640515.1-201ENST00000617215 977 ntBASIC11.11□□□□□ -0.63
SNAI2O43623 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SNAI2O43623 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
SNAI2O43623 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 AC015909.5-201ENST00000624336 2266 ntBASIC11.11□□□□□ -0.63
SNAI2O43623 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SNAI2O43623 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.11□□□□□ -0.63
SNAI2O43623 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.11□□□□□ -0.63
SNAI2O43623 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNAI2O43623 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SNAI2O43623 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.1□□□□□ -0.63
SNAI2O43623 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SNAI2O43623 AGGF1P1-201ENST00000509500 2073 ntBASIC11.1□□□□□ -0.63
SNAI2O43623 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SNAI2O43623 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.1□□□□□ -0.63
SNAI2O43623 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SNAI2O43623 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
SNAI2O43623 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SNAI2O43623 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SNAI2O43623 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.1□□□□□ -0.63
SNAI2O43623 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.1□□□□□ -0.63
SNAI2O43623 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.1□□□□□ -0.63
SNAI2O43623 TPM4P1-201ENST00000436100 807 ntBASIC11.1□□□□□ -0.63
SNAI2O43623 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.1□□□□□ -0.63
SNAI2O43623 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms